Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 GDPD5-212ENST00000531759 2633 ntTSL 511.34□□□□□ -0.597e-7■■□□□ 13.7
LSM11P83369 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.12■□□□□ 0.171e-6■■□□□ 13.7
LSM11P83369 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.011e-6■■□□□ 13.7
LSM11P83369 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.231e-6■■□□□ 13.7
LSM11P83369 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.291e-6■■□□□ 13.7
LSM11P83369 CRELD1-205ENST00000435417 966 ntTSL 512.74□□□□□ -0.371e-6■■□□□ 13.7
LSM11P83369 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.96■□□□□ 0.147e-8■■□□□ 13.6
LSM11P83369 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.077e-8■■□□□ 13.6
LSM11P83369 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.07■□□□□ 07e-8■■□□□ 13.6
LSM11P83369 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.712e-7■■□□□ 13.6
LSM11P83369 CLEC2D-207ENST00000460309 761 ntTSL 515.7■□□□□ 0.12e-7■■□□□ 13.6
LSM11P83369 GDI1-211ENST00000481304 1014 ntTSL 1 (best)14.38□□□□□ -0.112e-7■■□□□ 13.6
LSM11P83369 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.282e-7■■□□□ 13.6
LSM11P83369 CLEC2D-206ENST00000444971 1508 ntTSL 1 (best)12.63□□□□□ -0.392e-7■■□□□ 13.6
LSM11P83369 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.45□□□□□ -0.422e-7■■□□□ 13.6
LSM11P83369 GDI1-213ENST00000489589 918 ntTSL 210.54□□□□□ -0.722e-7■■□□□ 13.6
LSM11P83369 CLEC2D-205ENST00000430909 850 ntTSL 1 (best)10.39□□□□□ -0.752e-7■■□□□ 13.6
LSM11P83369 GDI1-208ENST00000471972 534 ntTSL 210.28□□□□□ -0.762e-7■■□□□ 13.6
LSM11P83369 CLEC2D-204ENST00000325960 1552 ntTSL 29.08□□□□□ -0.962e-7■■□□□ 13.6
LSM11P83369 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC8.3□□□□□ -1.082e-7■■□□□ 13.6
LSM11P83369 CLEC2D-210ENST00000479877 1855 ntTSL 28.2□□□□□ -1.12e-7■■□□□ 13.6
LSM11P83369 CLEC2D-215ENST00000544322 389 ntTSL 1 (best)7.5□□□□□ -1.212e-7■■□□□ 13.6
LSM11P83369 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC7.37□□□□□ -1.232e-7■■□□□ 13.6
LSM11P83369 ATP6V0A1-211ENST00000587299 1000 ntTSL 37.3□□□□□ -1.242e-7■■□□□ 13.6
LSM11P83369 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.352e-7■■□□□ 13.6
LSM11P83369 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.26□□□□□ -1.412e-7■■□□□ 13.6
LSM11P83369 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.67■□□□□ 0.742e-8■■□□□ 13.6
LSM11P83369 MAPK8IP3-206ENST00000563868 890 ntTSL 214.19□□□□□ -0.147e-7■■□□□ 13.6
LSM11P83369 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.383e-6■■□□□ 13.6
LSM11P83369 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.273e-6■■□□□ 13.6
LSM11P83369 SLCO4A1-208ENST00000497209 3092 ntTSL 1 (best)14.27□□□□□ -0.133e-6■■□□□ 13.6
LSM11P83369 HNRNPH1-248ENST00000524179 598 ntTSL 213.2□□□□□ -0.32e-11■■□□□ 13.6
LSM11P83369 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.461e-6■■□□□ 13.6
LSM11P83369 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.461e-6■■□□□ 13.6
LSM11P83369 ATF6B-216ENST00000494022 320 ntTSL 210.9□□□□□ -0.661e-6■■□□□ 13.6
LSM11P83369 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.91■□□□□ 0.36e-7■■□□□ 13.6
LSM11P83369 SULT1A1-209ENST00000567512 615 ntTSL 311.01□□□□□ -0.652e-9■■□□□ 13.6
LSM11P83369 SULT1A1-208ENST00000566189 939 ntTSL 510.82□□□□□ -0.682e-9■■□□□ 13.6
LSM11P83369 FANCA-217ENST00000564969 850 ntTSL 310.22□□□□□ -0.778e-7■■□□□ 13.6
LSM11P83369 TAF1C-217ENST00000566903 2628 ntTSL 514.62□□□□□ -0.073e-6■■□□□ 13.6
LSM11P83369 TAF1C-212ENST00000564774 4637 ntTSL 212.25□□□□□ -0.453e-6■■□□□ 13.6
LSM11P83369 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.493e-6■■□□□ 13.6
LSM11P83369 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.593e-6■■□□□ 13.6
LSM11P83369 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.623e-6■■□□□ 13.6
LSM11P83369 TAF1C-209ENST00000564208 3810 ntTSL 210.61□□□□□ -0.713e-6■■□□□ 13.6
LSM11P83369 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.124e-7■■□□□ 13.6
LSM11P83369 OAZ1-208ENST00000592727 726 ntTSL 213.32□□□□□ -0.283e-7■■□□□ 13.6
LSM11P83369 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.459e-7■■□□□ 13.5
LSM11P83369 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.449e-7■■□□□ 13.5
LSM11P83369 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.289e-7■■□□□ 13.5
LSM11P83369 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.146e-9■■□□□ 13.5
LSM11P83369 EIF3G-210ENST00000590158 1034 ntTSL 214□□□□□ -0.179e-7■■□□□ 13.5
LSM11P83369 FAAH-203ENST00000484697 1046 ntTSL 1 (best)13.46□□□□□ -0.259e-7■■□□□ 13.5
LSM11P83369 COQ8A-204ENST00000476488 264 ntTSL 313.09□□□□□ -0.319e-7■■□□□ 13.5
LSM11P83369 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.339e-7■■□□□ 13.5
LSM11P83369 SENP3-203ENST00000580231 901 ntTSL 312.73□□□□□ -0.379e-7■■□□□ 13.5
LSM11P83369 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.449e-7■■□□□ 13.5
LSM11P83369 SENP3-209ENST00000610454 606 ntTSL 311.63□□□□□ -0.559e-7■■□□□ 13.5
LSM11P83369 RABGGTB-203ENST00000459697 1177 ntTSL 210.4□□□□□ -0.746e-9■■□□□ 13.5
LSM11P83369 MAN2A2-230ENST00000561448 1443 ntTSL 29.86□□□□□ -0.831e-9■■□□□ 13.5
LSM11P83369 EIF3G-213ENST00000593054 453 ntTSL 59.49□□□□□ -0.899e-7■■□□□ 13.5
LSM11P83369 SENP3-207ENST00000582789 536 ntTSL 29.31□□□□□ -0.929e-7■■□□□ 13.5
LSM11P83369 SENP3-206ENST00000581093 493 ntTSL 59.11□□□□□ -0.959e-7■■□□□ 13.5
LSM11P83369 SENP3-205ENST00000581010 527 nt6.75□□□□□ -1.339e-7■■□□□ 13.5
LSM11P83369 RABGGTB-208ENST00000471759 2137 ntTSL 26.26□□□□□ -1.416e-9■■□□□ 13.5
LSM11P83369 RABGGTB-213ENST00000496055 3863 ntTSL 24.3□□□□□ -1.726e-9■■□□□ 13.5
LSM11P83369 MCF2L-201ENST00000261963 2419 ntTSL 1 (best)21.18■□□□□ 0.981e-7■■□□□ 13.5
LSM11P83369 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.66■□□□□ 0.427e-11■■□□□ 13.5
LSM11P83369 MCF2L-221ENST00000469415 3027 ntTSL 1 (best)17.02■□□□□ 0.321e-7■■□□□ 13.5
LSM11P83369 POLR3E-211ENST00000564750 2327 ntTSL 216.37■□□□□ 0.217e-11■■□□□ 13.5
LSM11P83369 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.12■□□□□ 0.177e-11■■□□□ 13.5
LSM11P83369 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.87■□□□□ 0.137e-11■■□□□ 13.5
LSM11P83369 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.51■□□□□ 0.071e-7■■□□□ 13.5
LSM11P83369 MCF2L-229ENST00000488765 3205 ntTSL 215.4■□□□□ 0.061e-7■■□□□ 13.5
LSM11P83369 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.021e-7■■□□□ 13.5
LSM11P83369 MCF2L-205ENST00000397017 3903 ntTSL 514.18□□□□□ -0.141e-7■■□□□ 13.5
LSM11P83369 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.527e-11■■□□□ 13.5
LSM11P83369 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC11.69□□□□□ -0.547e-11■■□□□ 13.5
LSM11P83369 POLR3E-213ENST00000565117 1549 ntTSL 210.98□□□□□ -0.657e-11■■□□□ 13.5
LSM11P83369 POLR3E-206ENST00000563282 448 ntTSL 24.31□□□□□ -1.727e-11■■□□□ 13.5
LSM11P83369 EXOC7-202ENST00000335146 3519 ntTSL 1 (best) BASIC10.19□□□□□ -0.785e-6■■□□□ 13.5
LSM11P83369 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC8.07□□□□□ -1.125e-6■■□□□ 13.5
LSM11P83369 STK36-204ENST00000419433 2093 ntTSL 29.95□□□□□ -0.822e-6■■□□□ 13.5
LSM11P83369 STK36-207ENST00000440309 4721 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.852e-6■■□□□ 13.5
LSM11P83369 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC8.99□□□□□ -0.972e-6■■□□□ 13.5
LSM11P83369 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.092e-6■■□□□ 13.5
LSM11P83369 DGKD-204ENST00000430834 5379 ntTSL 1 (best)13.2□□□□□ -0.37e-8■■□□□ 13.5
LSM11P83369 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.487e-8■■□□□ 13.5
LSM11P83369 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.597e-8■■□□□ 13.5
LSM11P83369 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.35■□□□□ 0.219e-7■■□□□ 13.5
LSM11P83369 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.089e-7■■□□□ 13.5
LSM11P83369 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.43□□□□□ -0.429e-7■■□□□ 13.5
LSM11P83369 PACSIN2-211ENST00000507586 362 ntTSL 35.53□□□□□ -1.529e-7■■□□□ 13.5
LSM11P83369 FDXR-208ENST00000578473 2482 ntTSL 1 (best)20.05■□□□□ 0.87e-8■■□□□ 13.5
LSM11P83369 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.647e-8■■□□□ 13.5
LSM11P83369 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.72■□□□□ 0.597e-8■■□□□ 13.5
LSM11P83369 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.59■□□□□ 0.577e-8■■□□□ 13.5
LSM11P83369 FDXR-206ENST00000577509 1912 ntTSL 218.51■□□□□ 0.557e-8■■□□□ 13.5
LSM11P83369 FDXR-218ENST00000583881 1561 ntTSL 218.18■□□□□ 0.57e-8■■□□□ 13.5
LSM11P83369 FDXR-209ENST00000579482 2157 ntTSL 217.9■□□□□ 0.467e-8■■□□□ 13.5
Retrieved 100 of 11,495 protein–RNA pairs in 63.6 ms