Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN2P57739 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN2P57739 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN2P57739 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN2P57739 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.91■□□□□ 0.78
CLDN2P57739 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN2P57739 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN2P57739 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN2P57739 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CLDN2P57739 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN2P57739 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.9■□□□□ 0.78
CLDN2P57739 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.9■□□□□ 0.78
CLDN2P57739 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN2P57739 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN2P57739 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN2P57739 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN2P57739 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLDN2P57739 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN2P57739 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN2P57739 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN2P57739 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN2P57739 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN2P57739 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CLDN2P57739 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN2P57739 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN2P57739 RPS2P55-201ENST00000397318 883 ntBASIC19.89■□□□□ 0.77
CLDN2P57739 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDN2P57739 AC107956.1-201ENST00000494359 873 ntBASIC19.89■□□□□ 0.77
CLDN2P57739 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDN2P57739 PRKY-204ENST00000533551 1019 ntBASIC19.89■□□□□ 0.77
CLDN2P57739 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN2P57739 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN2P57739 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.89■□□□□ 0.77
CLDN2P57739 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLDN2P57739 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDN2P57739 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN2P57739 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
CLDN2P57739 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN2P57739 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.88■□□□□ 0.77
CLDN2P57739 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN2P57739 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN2P57739 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.88■□□□□ 0.77
CLDN2P57739 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN2P57739 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLDN2P57739 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLDN2P57739 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN2P57739 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN2P57739 PTBP1P-201ENST00000554374 1601 ntBASIC19.87■□□□□ 0.77
CLDN2P57739 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN2P57739 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLDN2P57739 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLDN2P57739 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN2P57739 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN2P57739 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLDN2P57739 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN2P57739 TSPY7P-201ENST00000431358 1114 ntBASIC19.87■□□□□ 0.77
CLDN2P57739 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN2P57739 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN2P57739 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN2P57739 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN2P57739 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN2P57739 AC233702.5-201ENST00000584107 538 ntBASIC19.87■□□□□ 0.77
CLDN2P57739 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.87■□□□□ 0.77
CLDN2P57739 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CLDN2P57739 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN2P57739 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms