Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
CLDN20P56880 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 AC087289.5-201ENST00000586076 3175 ntBASIC18.41■□□□□ 0.54
CLDN20P56880 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN20P56880 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLDN20P56880 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLDN20P56880 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN20P56880 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDN20P56880 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN20P56880 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN20P56880 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDN20P56880 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN20P56880 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLDN20P56880 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CLDN20P56880 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CLDN20P56880 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLDN20P56880 GABARAPL3-202ENST00000624044 1851 ntBASIC18.41■□□□□ 0.54
CLDN20P56880 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN20P56880 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN20P56880 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN20P56880 AFG3L1P-217ENST00000557444 2447 ntBASIC18.4■□□□□ 0.54
CLDN20P56880 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN20P56880 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLDN20P56880 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN20P56880 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDN20P56880 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN20P56880 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLDN20P56880 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN20P56880 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN20P56880 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLDN20P56880 DUSP5P2-201ENST00000426873 1033 ntBASIC18.4■□□□□ 0.54
CLDN20P56880 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CLDN20P56880 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.4■□□□□ 0.54
CLDN20P56880 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN20P56880 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN20P56880 AL589743.5-201ENST00000616611 1050 ntBASIC18.4■□□□□ 0.54
CLDN20P56880 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CLDN20P56880 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN20P56880 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN20P56880 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN20P56880 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLDN20P56880 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.39■□□□□ 0.54
CLDN20P56880 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.39■□□□□ 0.54
CLDN20P56880 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CLDN20P56880 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.39■□□□□ 0.54
CLDN20P56880 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLDN20P56880 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN20P56880 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.39■□□□□ 0.53
CLDN20P56880 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN20P56880 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.39■□□□□ 0.53
CLDN20P56880 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN20P56880 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.39■□□□□ 0.53
CLDN20P56880 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.39■□□□□ 0.53
CLDN20P56880 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.39■□□□□ 0.53
CLDN20P56880 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLDN20P56880 AC027702.1-201ENST00000563810 1770 ntBASIC18.39■□□□□ 0.53
CLDN20P56880 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLDN20P56880 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 AC087633.2-202ENST00000565166 1439 ntBASIC18.39■□□□□ 0.53
CLDN20P56880 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLDN20P56880 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN20P56880 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN20P56880 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CLDN20P56880 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CLDN20P56880 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN20P56880 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CLDN20P56880 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN20P56880 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLDN20P56880 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN20P56880 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN20P56880 AC091874.3-201ENST00000512672 1195 ntBASIC18.38■□□□□ 0.53
CLDN20P56880 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms