Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 PDR11YIL013C 4236 nt2.78□□□□□ -1.96
UFD2P54860 RLM1YPL089C 2031 nt2.78□□□□□ -1.96
UFD2P54860 RPL33BYOR234C 324 nt2.77□□□□□ -1.97
UFD2P54860 YOR345CYOR345C 351 nt2.77□□□□□ -1.97
UFD2P54860 ESC1YMR219W 4977 nt2.77□□□□□ -1.97
UFD2P54860 MSB1YOR188W 3414 nt2.77□□□□□ -1.97
UFD2P54860 SCP160YJL080C 3669 nt2.77□□□□□ -1.97
UFD2P54860 TRS130YMR218C 3309 nt2.76□□□□□ -1.97
UFD2P54860 SMC6YLR383W 3345 nt2.76□□□□□ -1.97
UFD2P54860 UBR1YGR184C 5853 nt2.76□□□□□ -1.97
UFD2P54860 NOP14YDL148C 2433 nt2.76□□□□□ -1.97
UFD2P54860 ATP7YKL016C 525 nt2.76□□□□□ -1.97
UFD2P54860 YMR242W-AYMR242W-A 90 nt2.76□□□□□ -1.97
UFD2P54860 RAD34YDR314C 2079 nt2.75□□□□□ -1.97
UFD2P54860 NAM7YMR080C 2916 nt2.75□□□□□ -1.97
UFD2P54860 HSH155YMR288W 2916 nt2.75□□□□□ -1.97
UFD2P54860 PMP1YCR024C-A 123 nt2.75□□□□□ -1.97
UFD2P54860 YEL073CYEL073C 324 nt2.75□□□□□ -1.97
UFD2P54860 JSN1YJR091C 3276 nt2.75□□□□□ -1.97
UFD2P54860 ZIP2YGL249W 2115 nt2.74□□□□□ -1.97
UFD2P54860 YCR102W-AYCR102W-A 198 nt2.74□□□□□ -1.97
UFD2P54860 YDR209CYDR209C 414 nt2.74□□□□□ -1.97
UFD2P54860 CAT2YML042W 2013 nt2.74□□□□□ -1.97
UFD2P54860 STE11YLR362W 2154 nt2.74□□□□□ -1.97
UFD2P54860 NUP100YKL068W 2880 nt2.74□□□□□ -1.97
UFD2P54860 ZIP1YDR285W 2628 nt2.73□□□□□ -1.97
UFD2P54860 YIR044CYIR044C 186 nt2.73□□□□□ -1.97
UFD2P54860 TFC8YPL007C 1767 nt2.73□□□□□ -1.97
UFD2P54860 ENV11YGR071C 2583 nt2.73□□□□□ -1.97
UFD2P54860 NOC3YLR002C 1992 nt2.72□□□□□ -1.97
UFD2P54860 FAR11YNL127W 2862 nt2.72□□□□□ -1.97
UFD2P54860 RPS29AYLR388W 171 nt2.72□□□□□ -1.97
UFD2P54860 YOR108C-AYOR108C-A 210 nt2.72□□□□□ -1.97
UFD2P54860 SAS3YBL052C 2496 nt2.71□□□□□ -1.98
UFD2P54860 APL5YPL195W 2799 nt2.71□□□□□ -1.98
UFD2P54860 SGS1YMR190C 4344 nt2.7□□□□□ -1.98
UFD2P54860 ISW1YBR245C 3390 nt2.7□□□□□ -1.98
UFD2P54860 RPL31AYDL075W 342 nt2.7□□□□□ -1.98
UFD2P54860 RPS17AYML024W 411 nt2.7□□□□□ -1.98
UFD2P54860 PRP42YDR235W 1635 nt2.7□□□□□ -1.98
UFD2P54860 MAD1YGL086W 2250 nt2.7□□□□□ -1.98
UFD2P54860 DCP2YNL118C 2913 nt2.69□□□□□ -1.98
UFD2P54860 YFR016CYFR016C 3702 nt2.69□□□□□ -1.98
UFD2P54860 TOP2YNL088W 4287 nt2.69□□□□□ -1.98
UFD2P54860 PAU3YCR104W 375 nt2.69□□□□□ -1.98
UFD2P54860 YLL019W-AYLL019W-A 93 nt2.69□□□□□ -1.98
UFD2P54860 YBL005W-BYBL005W-B 5268 nt2.69□□□□□ -1.98
UFD2P54860 YDL196WYDL196W 330 nt2.68□□□□□ -1.98
UFD2P54860 YHR210CYHR210C 1026 nt2.68□□□□□ -1.98
UFD2P54860 YBL053WYBL053W 375 nt2.68□□□□□ -1.98
UFD2P54860 TUS1YLR425W 3924 nt2.68□□□□□ -1.98
UFD2P54860 NCA2YPR155C 1851 nt2.68□□□□□ -1.98
UFD2P54860 APL2YKL135C 2181 nt2.68□□□□□ -1.98
UFD2P54860 COY1YKL179C 2040 nt2.68□□□□□ -1.98
UFD2P54860 TRA1YHR099W 11235 nt2.67□□□□□ -1.98
UFD2P54860 SCD5YOR329C 2619 nt2.66□□□□□ -1.98
UFD2P54860 KTI11YBL071W-A 249 nt2.66□□□□□ -1.98
UFD2P54860 YLL007CYLL007C 1998 nt2.66□□□□□ -1.98
UFD2P54860 MAK10YEL053C 2202 nt2.66□□□□□ -1.98
UFD2P54860 ORC2YBR060C 1863 nt2.65□□□□□ -1.98
UFD2P54860 SNU13YEL026W 381 nt2.64□□□□□ -1.99
UFD2P54860 FIG4YNL325C 2640 nt2.64□□□□□ -1.99
UFD2P54860 HAL9YOL089C 3093 nt2.64□□□□□ -1.99
UFD2P54860 MSH5YDL154W 2706 nt2.63□□□□□ -1.99
UFD2P54860 YDR341CYDR341C 1824 nt2.63□□□□□ -1.99
UFD2P54860 AHC1YOR023C 1701 nt2.63□□□□□ -1.99
UFD2P54860 SVL3YPL032C 2478 nt2.63□□□□□ -1.99
UFD2P54860 GIP3YPL137C 3831 nt2.63□□□□□ -1.99
UFD2P54860 AIM44YPL158C 2277 nt2.62□□□□□ -1.99
UFD2P54860 MLH3YPL164C 2148 nt2.62□□□□□ -1.99
UFD2P54860 MLH1YMR167W 2310 nt2.62□□□□□ -1.99
UFD2P54860 SIR3YLR442C 2937 nt2.62□□□□□ -1.99
UFD2P54860 TRL1YJL087C 2484 nt2.62□□□□□ -1.99
UFD2P54860 RAV1YJR033C 4074 nt2.62□□□□□ -1.99
UFD2P54860 KRE33YNL132W 3171 nt2.61□□□□□ -1.99
UFD2P54860 EDS1YBR033W 2760 nt2.61□□□□□ -1.99
UFD2P54860 NUP170YBL079W 4509 nt2.61□□□□□ -1.99
UFD2P54860 PIP2YOR363C 2991 nt2.61□□□□□ -1.99
UFD2P54860 DGR2YKL121W 2559 nt2.6□□□□□ -1.99
UFD2P54860 CHC1YGL206C 4962 nt2.6□□□□□ -1.99
UFD2P54860 PTP2YOR208W 2253 nt2.59□□□□□ -1.99
UFD2P54860 YDR239CYDR239C 2364 nt2.59□□□□□ -1.99
UFD2P54860 SAP190YKR028W 3102 nt2.59□□□□□ -1.99
UFD2P54860 BRP1YGL007W 378 nt2.59□□□□□ -1.99
UFD2P54860 SPF1YEL031W 3648 nt2.58□□□□□ -2
UFD2P54860 SYH1YPL105C 2550 nt2.58□□□□□ -2
UFD2P54860 CDC60YPL160W 3273 nt2.57□□□□□ -2
UFD2P54860 YEF3YLR249W 3135 nt2.57□□□□□ -2
UFD2P54860 PIG1YLR273C 1947 nt2.57□□□□□ -2
UFD2P54860 RTT107YHR154W 3213 nt2.57□□□□□ -2
UFD2P54860 YOR343W-BYOR343W-B 5313 nt2.56□□□□□ -2
UFD2P54860 YKR075W-AYKR075W-A 270 nt2.56□□□□□ -2
UFD2P54860 ACM1YPL267W 630 nt2.56□□□□□ -2
UFD2P54860 VPS13YLL040C 9435 nt2.55□□□□□ -2
UFD2P54860 IRA2YOL081W 9240 nt2.55□□□□□ -2
UFD2P54860 RPL37BYDR500C 267 nt2.55□□□□□ -2
UFD2P54860 SLD3YGL113W 2007 nt2.55□□□□□ -2
UFD2P54860 TFC3YAL001C 3483 nt2.55□□□□□ -2
UFD2P54860 AGC1YPR021C 2709 nt2.55□□□□□ -2
UFD2P54860 UBP1YDL122W 2430 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 61.2 ms