Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.09■□□□□ 0.97
EPHB3P54753 AL121906.2-201ENST00000621597 723 ntBASIC21.09■□□□□ 0.97
EPHB3P54753 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EPHB3P54753 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.09■□□□□ 0.97
EPHB3P54753 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.09■□□□□ 0.97
EPHB3P54753 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EPHB3P54753 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHB3P54753 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHB3P54753 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
EPHB3P54753 AC124283.5-201ENST00000624661 1809 ntBASIC21.08■□□□□ 0.97
EPHB3P54753 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
EPHB3P54753 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
EPHB3P54753 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
EPHB3P54753 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
EPHB3P54753 KRT17P2-201ENST00000300992 1314 ntBASIC21.08■□□□□ 0.97
EPHB3P54753 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.08■□□□□ 0.97
EPHB3P54753 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EPHB3P54753 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EPHB3P54753 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EPHB3P54753 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.08■□□□□ 0.97
EPHB3P54753 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EPHB3P54753 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.08■□□□□ 0.97
EPHB3P54753 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.08■□□□□ 0.97
EPHB3P54753 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EPHB3P54753 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EPHB3P54753 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
EPHB3P54753 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EPHB3P54753 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EPHB3P54753 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EPHB3P54753 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
EPHB3P54753 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHB3P54753 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.07■□□□□ 0.96
EPHB3P54753 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.07■□□□□ 0.96
EPHB3P54753 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHB3P54753 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EPHB3P54753 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
EPHB3P54753 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EPHB3P54753 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHB3P54753 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHB3P54753 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EPHB3P54753 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.07■□□□□ 0.96
EPHB3P54753 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.07■□□□□ 0.96
EPHB3P54753 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.07■□□□□ 0.96
EPHB3P54753 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.07■□□□□ 0.96
EPHB3P54753 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.07■□□□□ 0.96
EPHB3P54753 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHB3P54753 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.07■□□□□ 0.96
EPHB3P54753 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHB3P54753 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
EPHB3P54753 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.06■□□□□ 0.96
EPHB3P54753 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
EPHB3P54753 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
EPHB3P54753 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.06■□□□□ 0.96
EPHB3P54753 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 KRT8P20-201ENST00000423953 1409 ntBASIC21.06■□□□□ 0.96
EPHB3P54753 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
EPHB3P54753 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
EPHB3P54753 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 TSPY7P-201ENST00000431358 1114 ntBASIC21.06■□□□□ 0.96
EPHB3P54753 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.06■□□□□ 0.96
EPHB3P54753 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.06■□□□□ 0.96
EPHB3P54753 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
EPHB3P54753 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.06■□□□□ 0.96
EPHB3P54753 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EPHB3P54753 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
EPHB3P54753 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB3P54753 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
EPHB3P54753 AL121603.2-201ENST00000557373 2117 ntBASIC21.05■□□□□ 0.96
EPHB3P54753 AF106564.1-201ENST00000607058 2553 ntBASIC21.05■□□□□ 0.96
EPHB3P54753 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB3P54753 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB3P54753 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.05■□□□□ 0.96
EPHB3P54753 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.05■□□□□ 0.96
EPHB3P54753 PTBP1P-201ENST00000554374 1601 ntBASIC21.05■□□□□ 0.96
EPHB3P54753 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHB3P54753 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB3P54753 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.05■□□□□ 0.96
EPHB3P54753 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB3P54753 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.05■□□□□ 0.96
EPHB3P54753 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB3P54753 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHB3P54753 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB3P54753 AL031963.3-201ENST00000606441 850 ntBASIC21.05■□□□□ 0.96
EPHB3P54753 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.05■□□□□ 0.96
EPHB3P54753 AC073912.3-201ENST00000624414 853 ntBASIC21.05■□□□□ 0.96
EPHB3P54753 AC079834.2-201ENST00000609776 1949 ntBASIC21.05■□□□□ 0.96
EPHB3P54753 NBPF21P-201ENST00000425093 1451 ntBASIC21.05■□□□□ 0.96
EPHB3P54753 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB3P54753 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHB3P54753 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHB3P54753 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms