Protein–RNA interactions for Protein: P53905

LSM7, U6 snRNA-associated Sm-like protein LSm7, yeastyeast

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM7P53905 tT(AGU)JtT(AGU)J 73 nt0.55□□□□□ -2.32
LSM7P53905 tT(AGU)N1tT(AGU)N1 73 nt0.55□□□□□ -2.32
LSM7P53905 tT(AGU)N2tT(AGU)N2 73 nt0.55□□□□□ -2.32
LSM7P53905 tT(AGU)O1tT(AGU)O1 73 nt0.55□□□□□ -2.32
LSM7P53905 tT(AGU)O2tT(AGU)O2 73 nt0.55□□□□□ -2.32
LSM7P53905 UBX4YMR067C 1251 nt0.55□□□□□ -2.32
LSM7P53905 SNU56YDR240C 1479 nt0.54□□□□□ -2.32
LSM7P53905 TSC3YBR058C-A 243 nt0.54□□□□□ -2.32
LSM7P53905 COG4YPR105C 2586 nt0.54□□□□□ -2.32
LSM7P53905 YJR003CYJR003C 1560 nt0.53□□□□□ -2.32
LSM7P53905 ZIP2YGL249W 2115 nt0.53□□□□□ -2.32
LSM7P53905 UBP3YER151C 2739 nt0.53□□□□□ -2.32
LSM7P53905 ISD11YER048W-A 285 nt0.53□□□□□ -2.32
LSM7P53905 YAR009CYAR009C 3591 nt0.53□□□□□ -2.32
LSM7P53905 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
LSM7P53905 GEA2YEL022W 4380 nt0.52□□□□□ -2.33
LSM7P53905 PRE4YFR050C 801 nt0.52□□□□□ -2.33
LSM7P53905 RTT102YGR275W 474 nt0.52□□□□□ -2.33
LSM7P53905 EFR3YMR212C 2349 nt0.52□□□□□ -2.33
LSM7P53905 HMLALPHA2YCL067C 633 nt0.51□□□□□ -2.33
LSM7P53905 MATALPHA2YCR039C 633 nt0.51□□□□□ -2.33
LSM7P53905 YFL012WYFL012W 447 nt0.51□□□□□ -2.33
LSM7P53905 ECM12YHR021W-A 456 nt0.51□□□□□ -2.33
LSM7P53905 YHR063W-AYHR063W-A 336 nt0.51□□□□□ -2.33
LSM7P53905 GPG1YGL121C 381 nt0.5□□□□□ -2.33
LSM7P53905 URM1YIL008W 300 nt0.5□□□□□ -2.33
LSM7P53905 PAM16YJL104W 450 nt0.5□□□□□ -2.33
LSM7P53905 YNL319WYNL319W 441 nt0.5□□□□□ -2.33
LSM7P53905 YOR108C-AYOR108C-A 210 nt0.5□□□□□ -2.33
LSM7P53905 PAN2YGL094C 3348 nt0.49□□□□□ -2.33
LSM7P53905 RPL9AYGL147C 576 nt0.49□□□□□ -2.33
LSM7P53905 YIL066W-AYIL066W-A 444 nt0.49□□□□□ -2.33
LSM7P53905 RPL38YLR325C 237 nt0.49□□□□□ -2.33
LSM7P53905 YDR029WYDR029W 315 nt0.48□□□□□ -2.33
LSM7P53905 RPS27AYKL156W 249 nt0.48□□□□□ -2.33
LSM7P53905 YPL182CYPL182C 384 nt0.48□□□□□ -2.33
LSM7P53905 BFR2YDR299W 1605 nt0.48□□□□□ -2.33
LSM7P53905 YML002WYML002W 2214 nt0.48□□□□□ -2.33
LSM7P53905 PRP16YKR086W 3216 nt0.47□□□□□ -2.33
LSM7P53905 snR78snR78 87 nt0.47□□□□□ -2.33
LSM7P53905 ANS1YHR126C 480 nt0.47□□□□□ -2.33
LSM7P53905 YJL135WYJL135W 318 nt0.47□□□□□ -2.33
LSM7P53905 YOR282WYOR282W 321 nt0.47□□□□□ -2.33
LSM7P53905 LOA1YPR139C 903 nt0.47□□□□□ -2.33
LSM7P53905 PAC1YOR269W 1485 nt0.47□□□□□ -2.33
LSM7P53905 BIG1YHR101C 1008 nt0.46□□□□□ -2.34
LSM7P53905 YMR290W-AYMR290W-A 348 nt0.46□□□□□ -2.34
LSM7P53905 YLL007CYLL007C 1998 nt0.45□□□□□ -2.34
LSM7P53905 LTE1YAL024C 4308 nt0.45□□□□□ -2.34
LSM7P53905 YHL042WYHL042W 453 nt0.45□□□□□ -2.34
LSM7P53905 YIL142C-AYIL142C-A 333 nt0.45□□□□□ -2.34
LSM7P53905 YMR141W-AYMR141W-A 225 nt0.45□□□□□ -2.34
LSM7P53905 RPB10YOR210W 213 nt0.45□□□□□ -2.34
LSM7P53905 PKH2YOL100W 3246 nt0.45□□□□□ -2.34
LSM7P53905 YKL123WYKL123W 381 nt0.44□□□□□ -2.34
LSM7P53905 YKL202WYKL202W 582 nt0.44□□□□□ -2.34
LSM7P53905 YCR001WYCR001W 315 nt0.43□□□□□ -2.34
LSM7P53905 PMP1YCR024C-A 123 nt0.42□□□□□ -2.34
LSM7P53905 YER087C-AYER087C-A 552 nt0.42□□□□□ -2.34
LSM7P53905 TIM13YGR181W 318 nt0.42□□□□□ -2.34
LSM7P53905 GPI15YNL038W 690 nt0.42□□□□□ -2.34
LSM7P53905 YOL160WYOL160W 342 nt0.42□□□□□ -2.34
LSM7P53905 tR(UCU)Q1tR(UCU)Q1 73 nt0.41□□□□□ -2.34
LSM7P53905 NFU1YKL040C 771 nt0.41□□□□□ -2.34
LSM7P53905 YLR269CYLR269C 351 nt0.41□□□□□ -2.34
LSM7P53905 NOP9YJL010C 2001 nt0.41□□□□□ -2.34
LSM7P53905 CHS6YJL099W 2241 nt0.41□□□□□ -2.34
LSM7P53905 NPR2YEL062W 1848 nt0.41□□□□□ -2.34
LSM7P53905 YDR344CYDR344C 444 nt0.39□□□□□ -2.35
LSM7P53905 YPL261CYPL261C 309 nt0.39□□□□□ -2.35
LSM7P53905 YBR076C-AYBR076C-A 267 nt0.39□□□□□ -2.35
LSM7P53905 RAD34YDR314C 2079 nt0.38□□□□□ -2.35
LSM7P53905 snR72snR72 98 nt0.38□□□□□ -2.35
LSM7P53905 RPF1YHR088W 888 nt0.38□□□□□ -2.35
LSM7P53905 CDC33YOL139C 642 nt0.38□□□□□ -2.35
LSM7P53905 PBI2YNL015W 228 nt0.36□□□□□ -2.35
LSM7P53905 EAF6YJR082C 342 nt0.35□□□□□ -2.35
LSM7P53905 UBC7YMR022W 498 nt0.35□□□□□ -2.35
LSM7P53905 snR51snR51 107 nt0.35□□□□□ -2.35
LSM7P53905 CUL3YGR003W 2235 nt0.35□□□□□ -2.35
LSM7P53905 WIP1YDR374W-A 270 nt0.34□□□□□ -2.36
LSM7P53905 YCK3YER123W 1575 nt0.34□□□□□ -2.36
LSM7P53905 YIL134C-AYIL134C-A 204 nt0.34□□□□□ -2.36
LSM7P53905 YIR044CYIR044C 186 nt0.34□□□□□ -2.36
LSM7P53905 YBL008W-AYBL008W-A 240 nt0.34□□□□□ -2.36
LSM7P53905 YBL071CYBL071C 309 nt0.34□□□□□ -2.36
LSM7P53905 YOR218CYOR218C 420 nt0.34□□□□□ -2.36
LSM7P53905 YDL011CYDL011C 324 nt0.33□□□□□ -2.36
LSM7P53905 EMC4YGL231C 573 nt0.33□□□□□ -2.36
LSM7P53905 RPS24BYIL069C 408 nt0.33□□□□□ -2.36
LSM7P53905 YJL020W-AYJL020W-A 258 nt0.33□□□□□ -2.36
LSM7P53905 RPL26AYLR344W 384 nt0.33□□□□□ -2.36
LSM7P53905 YPL044CYPL044C 549 nt0.33□□□□□ -2.36
LSM7P53905 RPL26BYGR034W 384 nt0.32□□□□□ -2.36
LSM7P53905 YML108WYML108W 318 nt0.32□□□□□ -2.36
LSM7P53905 YBR064WYBR064W 429 nt0.32□□□□□ -2.36
LSM7P53905 SDH7YDR511W 402 nt0.31□□□□□ -2.36
LSM7P53905 YEL030C-AYEL030C-A 315 nt0.31□□□□□ -2.36
LSM7P53905 BSC3YLR465C 309 nt0.31□□□□□ -2.36
LSM7P53905 OST1YJL002C 1431 nt0.3□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 44.1 ms