Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRP9P49458 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.79■□□□□ 0.44
SRP9P49458 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.79■□□□□ 0.44
SRP9P49458 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SRP9P49458 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.79■□□□□ 0.44
SRP9P49458 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
SRP9P49458 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.79■□□□□ 0.44
SRP9P49458 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SRP9P49458 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.79■□□□□ 0.44
SRP9P49458 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SRP9P49458 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.79■□□□□ 0.44
SRP9P49458 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP9P49458 AC061975.6-201ENST00000579045 1553 ntBASIC17.79■□□□□ 0.44
SRP9P49458 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SRP9P49458 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SRP9P49458 FP700111.2-201ENST00000619190 1892 ntBASIC17.78■□□□□ 0.44
SRP9P49458 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.78■□□□□ 0.44
SRP9P49458 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.78■□□□□ 0.44
SRP9P49458 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 SLC7A5P1-201ENST00000568957 537 ntBASIC17.78■□□□□ 0.44
SRP9P49458 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.78■□□□□ 0.44
SRP9P49458 UBE2DNL-204ENST00000602536 740 ntBASIC17.78■□□□□ 0.44
SRP9P49458 AL137784.2-201ENST00000607332 1000 ntBASIC17.78■□□□□ 0.44
SRP9P49458 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.78■□□□□ 0.44
SRP9P49458 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SRP9P49458 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP9P49458 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SRP9P49458 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.77■□□□□ 0.44
SRP9P49458 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.77■□□□□ 0.44
SRP9P49458 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.77■□□□□ 0.44
SRP9P49458 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.77■□□□□ 0.44
SRP9P49458 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.77■□□□□ 0.44
SRP9P49458 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.77■□□□□ 0.44
SRP9P49458 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.77■□□□□ 0.44
SRP9P49458 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SRP9P49458 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.77■□□□□ 0.44
SRP9P49458 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.77■□□□□ 0.44
SRP9P49458 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.77■□□□□ 0.44
SRP9P49458 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.77■□□□□ 0.44
SRP9P49458 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.77■□□□□ 0.44
SRP9P49458 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRP9P49458 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SRP9P49458 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SRP9P49458 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.76■□□□□ 0.43
SRP9P49458 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SRP9P49458 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SRP9P49458 SLC7A5P2-201ENST00000553010 536 ntBASIC17.76■□□□□ 0.43
SRP9P49458 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.76■□□□□ 0.43
SRP9P49458 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.76■□□□□ 0.43
SRP9P49458 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.76■□□□□ 0.43
SRP9P49458 MYCNOS-205ENST00000641950 531 ntBASIC17.76■□□□□ 0.43
SRP9P49458 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SRP9P49458 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.76■□□□□ 0.43
SRP9P49458 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRP9P49458 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SRP9P49458 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms