Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCNN1AP37088 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCNN1AP37088 KRT16P6-202ENST00000425692 1426 ntBASIC20.99■□□□□ 0.95
SCNN1AP37088 AL355802.2-201ENST00000402069 882 ntBASIC20.99■□□□□ 0.95
SCNN1AP37088 AC005829.2-201ENST00000571422 1056 ntBASIC20.99■□□□□ 0.95
SCNN1AP37088 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCNN1AP37088 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
SCNN1AP37088 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCNN1AP37088 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.99■□□□□ 0.95
SCNN1AP37088 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCNN1AP37088 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCNN1AP37088 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCNN1AP37088 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.98■□□□□ 0.95
SCNN1AP37088 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.98■□□□□ 0.95
SCNN1AP37088 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.98■□□□□ 0.95
SCNN1AP37088 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.98■□□□□ 0.95
SCNN1AP37088 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SCNN1AP37088 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SCNN1AP37088 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.98■□□□□ 0.95
SCNN1AP37088 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SCNN1AP37088 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCNN1AP37088 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SCNN1AP37088 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SCNN1AP37088 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.97■□□□□ 0.95
SCNN1AP37088 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.97■□□□□ 0.95
SCNN1AP37088 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 AC060766.5-201ENST00000590539 871 ntBASIC20.97■□□□□ 0.95
SCNN1AP37088 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SCNN1AP37088 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCNN1AP37088 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
SCNN1AP37088 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SCNN1AP37088 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SCNN1AP37088 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.97■□□□□ 0.95
SCNN1AP37088 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCNN1AP37088 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
SCNN1AP37088 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCNN1AP37088 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SCNN1AP37088 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCNN1AP37088 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCNN1AP37088 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SCNN1AP37088 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.96■□□□□ 0.95
SCNN1AP37088 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.96■□□□□ 0.95
SCNN1AP37088 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.96■□□□□ 0.95
SCNN1AP37088 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SCNN1AP37088 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.96■□□□□ 0.95
SCNN1AP37088 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCNN1AP37088 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SCNN1AP37088 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCNN1AP37088 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SCNN1AP37088 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCNN1AP37088 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.96■□□□□ 0.95
SCNN1AP37088 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCNN1AP37088 TCF3P1-201ENST00000423021 1937 ntBASIC20.96■□□□□ 0.95
SCNN1AP37088 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCNN1AP37088 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCNN1AP37088 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
SCNN1AP37088 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SCNN1AP37088 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.95■□□□□ 0.94
SCNN1AP37088 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SCNN1AP37088 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.95■□□□□ 0.94
SCNN1AP37088 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.95■□□□□ 0.94
SCNN1AP37088 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.95■□□□□ 0.94
SCNN1AP37088 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.95■□□□□ 0.94
SCNN1AP37088 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SCNN1AP37088 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms