Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.51■□□□□ 0.87
HLA-FP30511 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-FP30511 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-FP30511 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.51■□□□□ 0.87
HLA-FP30511 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-FP30511 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-FP30511 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.5■□□□□ 0.87
HLA-FP30511 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-FP30511 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.5■□□□□ 0.87
HLA-FP30511 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-FP30511 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-FP30511 AL596275.1-201ENST00000423464 877 ntBASIC20.5■□□□□ 0.87
HLA-FP30511 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
HLA-FP30511 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.5■□□□□ 0.87
HLA-FP30511 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.5■□□□□ 0.87
HLA-FP30511 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-FP30511 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HLA-FP30511 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-FP30511 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HLA-FP30511 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-FP30511 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-FP30511 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-FP30511 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-FP30511 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HLA-FP30511 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-FP30511 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-FP30511 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-FP30511 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.49■□□□□ 0.87
HLA-FP30511 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HLA-FP30511 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HLA-FP30511 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.49■□□□□ 0.87
HLA-FP30511 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.49■□□□□ 0.87
HLA-FP30511 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-FP30511 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HLA-FP30511 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-FP30511 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-FP30511 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-FP30511 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-FP30511 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-FP30511 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.48■□□□□ 0.87
HLA-FP30511 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-FP30511 KRASP1-201ENST00000407852 552 ntBASIC20.48■□□□□ 0.87
HLA-FP30511 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.48■□□□□ 0.87
HLA-FP30511 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-FP30511 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.48■□□□□ 0.87
HLA-FP30511 AL031963.3-201ENST00000606441 850 ntBASIC20.48■□□□□ 0.87
HLA-FP30511 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HLA-FP30511 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.48■□□□□ 0.87
HLA-FP30511 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-FP30511 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HLA-FP30511 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-FP30511 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
HLA-FP30511 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-FP30511 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HLA-FP30511 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HLA-FP30511 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.47■□□□□ 0.87
HLA-FP30511 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-FP30511 KRT8P20-201ENST00000423953 1409 ntBASIC20.47■□□□□ 0.87
HLA-FP30511 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-FP30511 HLA-G-202ENST00000376815 851 ntBASIC20.47■□□□□ 0.87
HLA-FP30511 HLA-G-203ENST00000376818 1127 ntBASIC20.47■□□□□ 0.87
HLA-FP30511 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
HLA-FP30511 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.47■□□□□ 0.87
HLA-FP30511 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-FP30511 Z99916.2-201ENST00000604037 246 ntBASIC20.47■□□□□ 0.87
HLA-FP30511 AL121829.2-201ENST00000620908 328 ntBASIC20.47■□□□□ 0.87
HLA-FP30511 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
HLA-FP30511 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-FP30511 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-FP30511 DPP3P2-201ENST00000416030 1696 ntBASIC20.47■□□□□ 0.87
HLA-FP30511 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
HLA-FP30511 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.47■□□□□ 0.87
HLA-FP30511 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
HLA-FP30511 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-FP30511 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-FP30511 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-FP30511 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HLA-FP30511 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HLA-FP30511 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HLA-FP30511 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-FP30511 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-FP30511 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-FP30511 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-FP30511 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HLA-FP30511 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-FP30511 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-FP30511 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-FP30511 AL137060.1-201ENST00000618151 2648 ntBASIC20.45■□□□□ 0.86
HLA-FP30511 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-FP30511 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms