Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.26■□□□□ 0.51
GDF1P27539 AC069544.1-201ENST00000609399 999 ntBASIC18.26■□□□□ 0.51
GDF1P27539 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
GDF1P27539 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.26■□□□□ 0.51
GDF1P27539 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
GDF1P27539 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.25■□□□□ 0.51
GDF1P27539 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
GDF1P27539 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.25■□□□□ 0.51
GDF1P27539 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GDF1P27539 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
GDF1P27539 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.25■□□□□ 0.51
GDF1P27539 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDF1P27539 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.24■□□□□ 0.51
GDF1P27539 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.24■□□□□ 0.51
GDF1P27539 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GDF1P27539 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
GDF1P27539 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GDF1P27539 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GDF1P27539 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
GDF1P27539 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GDF1P27539 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.24■□□□□ 0.51
GDF1P27539 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
GDF1P27539 GCSHP5-201ENST00000443090 522 ntBASIC18.24■□□□□ 0.51
GDF1P27539 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GDF1P27539 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.24■□□□□ 0.51
GDF1P27539 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.24■□□□□ 0.51
GDF1P27539 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.24■□□□□ 0.51
GDF1P27539 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.24■□□□□ 0.51
GDF1P27539 AC120498.8-201ENST00000614275 531 ntBASIC18.24■□□□□ 0.51
GDF1P27539 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.24■□□□□ 0.51
GDF1P27539 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GDF1P27539 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GDF1P27539 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GDF1P27539 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.24■□□□□ 0.51
GDF1P27539 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GDF1P27539 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GDF1P27539 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDF1P27539 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDF1P27539 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDF1P27539 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GDF1P27539 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.23■□□□□ 0.51
GDF1P27539 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.23■□□□□ 0.51
GDF1P27539 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.23■□□□□ 0.51
GDF1P27539 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.23■□□□□ 0.51
GDF1P27539 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.23■□□□□ 0.51
GDF1P27539 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.23■□□□□ 0.51
GDF1P27539 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDF1P27539 RPS2P52-201ENST00000469610 820 ntBASIC18.23■□□□□ 0.51
GDF1P27539 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
GDF1P27539 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
GDF1P27539 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.23■□□□□ 0.51
GDF1P27539 C1QBPP2-201ENST00000528754 825 ntBASIC18.23■□□□□ 0.51
GDF1P27539 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
GDF1P27539 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.23■□□□□ 0.51
GDF1P27539 AC233263.1-201ENST00000578059 224 ntBASIC18.23■□□□□ 0.51
GDF1P27539 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.23■□□□□ 0.51
GDF1P27539 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.23■□□□□ 0.51
GDF1P27539 FAM197Y4-202ENST00000622692 608 ntBASIC18.23■□□□□ 0.51
GDF1P27539 AC066615.1-201ENST00000640911 628 ntBASIC18.23■□□□□ 0.51
GDF1P27539 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDF1P27539 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GDF1P27539 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.23■□□□□ 0.51
GDF1P27539 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.23■□□□□ 0.51
GDF1P27539 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GDF1P27539 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDF1P27539 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDF1P27539 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GDF1P27539 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDF1P27539 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.22■□□□□ 0.51
GDF1P27539 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDF1P27539 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.22■□□□□ 0.51
GDF1P27539 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDF1P27539 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GDF1P27539 HLA-G-202ENST00000376815 851 ntBASIC18.22■□□□□ 0.51
GDF1P27539 HLA-G-203ENST00000376818 1127 ntBASIC18.22■□□□□ 0.51
GDF1P27539 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDF1P27539 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.22■□□□□ 0.51
GDF1P27539 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.22■□□□□ 0.51
GDF1P27539 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.22■□□□□ 0.51
GDF1P27539 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.22■□□□□ 0.51
GDF1P27539 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.22■□□□□ 0.51
GDF1P27539 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
GDF1P27539 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDF1P27539 AL137060.1-201ENST00000618151 2648 ntBASIC18.22■□□□□ 0.51
GDF1P27539 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms