Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.83■□□□□ 0.77
LAMA1P25391 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LAMA1P25391 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LAMA1P25391 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LAMA1P25391 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
LAMA1P25391 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.83■□□□□ 0.77
LAMA1P25391 ECEL1P2-202ENST00000465689 757 ntBASIC19.83■□□□□ 0.77
LAMA1P25391 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LAMA1P25391 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LAMA1P25391 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LAMA1P25391 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LAMA1P25391 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
LAMA1P25391 SLC25A3P1-201ENST00000443844 931 ntBASIC19.83■□□□□ 0.76
LAMA1P25391 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LAMA1P25391 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.83■□□□□ 0.76
LAMA1P25391 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LAMA1P25391 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LAMA1P25391 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LAMA1P25391 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.83■□□□□ 0.76
LAMA1P25391 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LAMA1P25391 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LAMA1P25391 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LAMA1P25391 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.82■□□□□ 0.76
LAMA1P25391 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.82■□□□□ 0.76
LAMA1P25391 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.82■□□□□ 0.76
LAMA1P25391 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LAMA1P25391 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LAMA1P25391 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.82■□□□□ 0.76
LAMA1P25391 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LAMA1P25391 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LAMA1P25391 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LAMA1P25391 WWOX-216ENST00000569818 525 ntBASIC19.82■□□□□ 0.76
LAMA1P25391 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
LAMA1P25391 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LAMA1P25391 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LAMA1P25391 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LAMA1P25391 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LAMA1P25391 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LAMA1P25391 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.81■□□□□ 0.76
LAMA1P25391 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LAMA1P25391 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.81■□□□□ 0.76
LAMA1P25391 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LAMA1P25391 AC104076.2-201ENST00000448912 469 ntBASIC19.81■□□□□ 0.76
LAMA1P25391 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LAMA1P25391 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.81■□□□□ 0.76
LAMA1P25391 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LAMA1P25391 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.81■□□□□ 0.76
LAMA1P25391 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LAMA1P25391 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LAMA1P25391 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LAMA1P25391 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
LAMA1P25391 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LAMA1P25391 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LAMA1P25391 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
LAMA1P25391 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.81■□□□□ 0.76
LAMA1P25391 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.81■□□□□ 0.76
LAMA1P25391 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.81■□□□□ 0.76
LAMA1P25391 AC005363.2-201ENST00000618631 242 ntBASIC19.81■□□□□ 0.76
LAMA1P25391 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.81■□□□□ 0.76
LAMA1P25391 AC027702.1-201ENST00000563810 1770 ntBASIC19.81■□□□□ 0.76
LAMA1P25391 HTR7P1-201ENST00000538670 1336 ntBASIC19.81■□□□□ 0.76
LAMA1P25391 GUSBP5-202ENST00000510805 1989 ntBASIC19.81■□□□□ 0.76
LAMA1P25391 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
LAMA1P25391 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LAMA1P25391 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LAMA1P25391 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LAMA1P25391 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.8■□□□□ 0.76
LAMA1P25391 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.8■□□□□ 0.76
LAMA1P25391 AC006011.2-201ENST00000621313 1158 ntBASIC19.8■□□□□ 0.76
LAMA1P25391 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.8■□□□□ 0.76
LAMA1P25391 MIR1238-201ENST00000408483 83 ntBASIC19.8■□□□□ 0.76
LAMA1P25391 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.8■□□□□ 0.76
LAMA1P25391 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.8■□□□□ 0.76
LAMA1P25391 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LAMA1P25391 AF106564.1-201ENST00000607058 2553 ntBASIC19.8■□□□□ 0.76
LAMA1P25391 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LAMA1P25391 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LAMA1P25391 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LAMA1P25391 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LAMA1P25391 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LAMA1P25391 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.79■□□□□ 0.76
LAMA1P25391 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.79■□□□□ 0.76
LAMA1P25391 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
LAMA1P25391 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.79■□□□□ 0.76
LAMA1P25391 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LAMA1P25391 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.79■□□□□ 0.76
LAMA1P25391 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LAMA1P25391 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.79■□□□□ 0.76
LAMA1P25391 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LAMA1P25391 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LAMA1P25391 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.79■□□□□ 0.76
LAMA1P25391 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LAMA1P25391 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.79■□□□□ 0.76
LAMA1P25391 AL121829.2-201ENST00000620908 328 ntBASIC19.79■□□□□ 0.76
LAMA1P25391 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LAMA1P25391 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LAMA1P25391 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LAMA1P25391 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LAMA1P25391 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.78■□□□□ 0.76
LAMA1P25391 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms