Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH3P22223 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH3P22223 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH3P22223 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH3P22223 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH3P22223 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH3P22223 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH3P22223 AC121338.2-201ENST00000622535 1744 ntBASIC19.65■□□□□ 0.74
CDH3P22223 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CDH3P22223 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH3P22223 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH3P22223 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH3P22223 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH3P22223 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH3P22223 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH3P22223 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH3P22223 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH3P22223 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH3P22223 FAM201B-201ENST00000458407 597 ntBASIC19.65■□□□□ 0.74
CDH3P22223 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH3P22223 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH3P22223 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH3P22223 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH3P22223 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH3P22223 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH3P22223 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH3P22223 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH3P22223 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH3P22223 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
CDH3P22223 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH3P22223 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH3P22223 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CDH3P22223 AL356652.1-201ENST00000615962 565 ntBASIC19.64■□□□□ 0.73
CDH3P22223 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH3P22223 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH3P22223 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH3P22223 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH3P22223 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH3P22223 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH3P22223 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH3P22223 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH3P22223 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH3P22223 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH3P22223 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH3P22223 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH3P22223 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH3P22223 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH3P22223 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH3P22223 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH3P22223 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH3P22223 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH3P22223 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH3P22223 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH3P22223 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.63■□□□□ 0.73
CDH3P22223 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH3P22223 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH3P22223 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH3P22223 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDH3P22223 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDH3P22223 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH3P22223 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH3P22223 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH3P22223 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH3P22223 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH3P22223 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CDH3P22223 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH3P22223 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.62■□□□□ 0.73
CDH3P22223 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH3P22223 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH3P22223 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH3P22223 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH3P22223 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH3P22223 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDH3P22223 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH3P22223 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH3P22223 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDH3P22223 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH3P22223 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms