Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CAPN3P20807 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CAPN3P20807 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.33■□□□□ 0.69
CAPN3P20807 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.33■□□□□ 0.69
CAPN3P20807 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CAPN3P20807 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CAPN3P20807 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN3P20807 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.33■□□□□ 0.68
CAPN3P20807 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN3P20807 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.33■□□□□ 0.68
CAPN3P20807 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.33■□□□□ 0.68
CAPN3P20807 SLC7A5P2-201ENST00000553010 536 ntBASIC19.33■□□□□ 0.68
CAPN3P20807 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.33■□□□□ 0.68
CAPN3P20807 AC104771.1-201ENST00000603335 964 ntBASIC19.33■□□□□ 0.68
CAPN3P20807 AC120498.10-201ENST00000621827 505 ntBASIC19.33■□□□□ 0.68
CAPN3P20807 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN3P20807 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN3P20807 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN3P20807 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN3P20807 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN3P20807 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN3P20807 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CAPN3P20807 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN3P20807 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN3P20807 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN3P20807 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN3P20807 CDCA4P2-201ENST00000441182 718 ntBASIC19.32■□□□□ 0.68
CAPN3P20807 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN3P20807 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN3P20807 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN3P20807 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CAPN3P20807 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN3P20807 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CAPN3P20807 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CAPN3P20807 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN3P20807 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN3P20807 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN3P20807 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN3P20807 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CAPN3P20807 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPN3P20807 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.31■□□□□ 0.68
CAPN3P20807 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CAPN3P20807 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.31■□□□□ 0.68
CAPN3P20807 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CAPN3P20807 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.31■□□□□ 0.68
CAPN3P20807 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 AC073111.5-205ENST00000641717 521 ntBASIC19.31■□□□□ 0.68
CAPN3P20807 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 KRT8P36-201ENST00000489121 1440 ntBASIC19.31■□□□□ 0.68
CAPN3P20807 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN3P20807 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN3P20807 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CAPN3P20807 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN3P20807 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPN3P20807 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPN3P20807 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPN3P20807 BX323043.1-201ENST00000641006 1765 ntBASIC19.3■□□□□ 0.68
CAPN3P20807 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CAPN3P20807 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN3P20807 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.3■□□□□ 0.68
CAPN3P20807 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.3■□□□□ 0.68
CAPN3P20807 AC137761.2-201ENST00000561729 223 ntBASIC19.3■□□□□ 0.68
CAPN3P20807 AC145350.3-201ENST00000569033 163 ntBASIC19.3■□□□□ 0.68
CAPN3P20807 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN3P20807 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPN3P20807 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CAPN3P20807 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN3P20807 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CAPN3P20807 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.3■□□□□ 0.68
CAPN3P20807 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN3P20807 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN3P20807 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CAPN3P20807 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CAPN3P20807 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN3P20807 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN3P20807 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN3P20807 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN3P20807 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.29■□□□□ 0.68
CAPN3P20807 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CAPN3P20807 BX119927.1-201ENST00000636596 1552 ntBASIC19.29■□□□□ 0.68
CAPN3P20807 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN3P20807 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CAPN3P20807 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.29■□□□□ 0.68
CAPN3P20807 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CAPN3P20807 TMEM179-206ENST00000616017 1645 ntBASIC19.29■□□□□ 0.68
CAPN3P20807 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN3P20807 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN3P20807 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.28■□□□□ 0.68
CAPN3P20807 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms