Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.78■■□□□ 1.72
SNRPA1P09661 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
SNRPA1P09661 KRT16P5-201ENST00000455284 522 ntBASIC25.78■■□□□ 1.72
SNRPA1P09661 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.78■■□□□ 1.72
SNRPA1P09661 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.78■■□□□ 1.72
SNRPA1P09661 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.78■■□□□ 1.72
SNRPA1P09661 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.78■■□□□ 1.72
SNRPA1P09661 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.78■■□□□ 1.72
SNRPA1P09661 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.78■■□□□ 1.72
SNRPA1P09661 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNRPA1P09661 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNRPA1P09661 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNRPA1P09661 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
SNRPA1P09661 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.78■■□□□ 1.72
SNRPA1P09661 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.78■■□□□ 1.72
SNRPA1P09661 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNRPA1P09661 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.78■■□□□ 1.72
SNRPA1P09661 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNRPA1P09661 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.77■■□□□ 1.72
SNRPA1P09661 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SNRPA1P09661 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.77■■□□□ 1.72
SNRPA1P09661 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
SNRPA1P09661 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.77■■□□□ 1.72
SNRPA1P09661 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.77■■□□□ 1.72
SNRPA1P09661 BX088651.1-201ENST00000540551 451 ntBASIC25.77■■□□□ 1.72
SNRPA1P09661 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.77■■□□□ 1.72
SNRPA1P09661 MIR4785-201ENST00000585005 73 ntBASIC25.77■■□□□ 1.72
SNRPA1P09661 AL031963.3-201ENST00000606441 850 ntBASIC25.77■■□□□ 1.72
SNRPA1P09661 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SNRPA1P09661 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.77■■□□□ 1.72
SNRPA1P09661 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SNRPA1P09661 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNRPA1P09661 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SNRPA1P09661 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
SNRPA1P09661 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.76■■□□□ 1.71
SNRPA1P09661 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
SNRPA1P09661 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNRPA1P09661 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SNRPA1P09661 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNRPA1P09661 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNRPA1P09661 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.76■■□□□ 1.71
SNRPA1P09661 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.76■■□□□ 1.71
SNRPA1P09661 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.76■■□□□ 1.71
SNRPA1P09661 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SNRPA1P09661 KRT8P20-201ENST00000423953 1409 ntBASIC25.76■■□□□ 1.71
SNRPA1P09661 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.76■■□□□ 1.71
SNRPA1P09661 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
SNRPA1P09661 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNRPA1P09661 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRPA1P09661 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRPA1P09661 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRPA1P09661 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRPA1P09661 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRPA1P09661 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRPA1P09661 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRPA1P09661 AC211429.1-201ENST00000415277 523 ntBASIC25.75■■□□□ 1.71
SNRPA1P09661 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.75■■□□□ 1.71
SNRPA1P09661 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.75■■□□□ 1.71
SNRPA1P09661 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.75■■□□□ 1.71
SNRPA1P09661 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.74■■□□□ 1.71
SNRPA1P09661 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.74■■□□□ 1.71
SNRPA1P09661 HTR7P1-201ENST00000538670 1336 ntBASIC25.74■■□□□ 1.71
SNRPA1P09661 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
SNRPA1P09661 ECEL1P3-201ENST00000427961 737 ntBASIC25.74■■□□□ 1.71
SNRPA1P09661 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.74■■□□□ 1.71
SNRPA1P09661 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.74■■□□□ 1.71
SNRPA1P09661 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.74■■□□□ 1.71
SNRPA1P09661 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SNRPA1P09661 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.74■■□□□ 1.71
SNRPA1P09661 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SNRPA1P09661 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNRPA1P09661 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SNRPA1P09661 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNRPA1P09661 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SNRPA1P09661 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNRPA1P09661 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SNRPA1P09661 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.73■■□□□ 1.71
SNRPA1P09661 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SNRPA1P09661 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.73■■□□□ 1.71
SNRPA1P09661 TSPY15P-201ENST00000457163 923 ntBASIC25.73■■□□□ 1.71
SNRPA1P09661 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.73■■□□□ 1.71
SNRPA1P09661 AF186192.3-201ENST00000583427 947 ntBASIC25.73■■□□□ 1.71
SNRPA1P09661 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC25.73■■□□□ 1.71
SNRPA1P09661 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.73■■□□□ 1.71
SNRPA1P09661 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SNRPA1P09661 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.73■■□□□ 1.71
SNRPA1P09661 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.73■■□□□ 1.71
SNRPA1P09661 AC079834.2-201ENST00000609776 1949 ntBASIC25.73■■□□□ 1.71
SNRPA1P09661 FP700111.2-201ENST00000619190 1892 ntBASIC25.72■■□□□ 1.71
SNRPA1P09661 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
SNRPA1P09661 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SNRPA1P09661 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.72■■□□□ 1.71
SNRPA1P09661 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
SNRPA1P09661 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.72■■□□□ 1.71
SNRPA1P09661 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNRPA1P09661 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.72■■□□□ 1.71
SNRPA1P09661 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.72■■□□□ 1.71
SNRPA1P09661 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNRPA1P09661 LINC00565-201ENST00000562710 2331 ntBASIC25.72■■□□□ 1.71
SNRPA1P09661 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms