Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP2P08253 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.31■□□□□ 0.84
MMP2P08253 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP2P08253 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP2P08253 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.31■□□□□ 0.84
MMP2P08253 AC097658.1-201ENST00000475555 843 ntBASIC20.31■□□□□ 0.84
MMP2P08253 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP2P08253 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.31■□□□□ 0.84
MMP2P08253 AC133041.1-202ENST00000642053 222 ntBASIC20.31■□□□□ 0.84
MMP2P08253 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
MMP2P08253 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP2P08253 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.31■□□□□ 0.84
MMP2P08253 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.31■□□□□ 0.84
MMP2P08253 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP2P08253 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.31■□□□□ 0.84
MMP2P08253 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP2P08253 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
MMP2P08253 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
MMP2P08253 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.3■□□□□ 0.84
MMP2P08253 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 KRT8P17-201ENST00000453110 1448 ntBASIC20.3■□□□□ 0.84
MMP2P08253 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.3■□□□□ 0.84
MMP2P08253 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.3■□□□□ 0.84
MMP2P08253 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MMP2P08253 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.3■□□□□ 0.84
MMP2P08253 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MMP2P08253 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.3■□□□□ 0.84
MMP2P08253 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MMP2P08253 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MMP2P08253 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.3■□□□□ 0.84
MMP2P08253 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP2P08253 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP2P08253 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MMP2P08253 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.29■□□□□ 0.84
MMP2P08253 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP2P08253 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
MMP2P08253 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
MMP2P08253 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MMP2P08253 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
MMP2P08253 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.29■□□□□ 0.84
MMP2P08253 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.29■□□□□ 0.84
MMP2P08253 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP2P08253 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.29■□□□□ 0.84
MMP2P08253 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.29■□□□□ 0.84
MMP2P08253 AC023632.3-201ENST00000521633 145 ntBASIC20.29■□□□□ 0.84
MMP2P08253 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.29■□□□□ 0.84
MMP2P08253 AL031963.3-201ENST00000606441 850 ntBASIC20.29■□□□□ 0.84
MMP2P08253 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP2P08253 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP2P08253 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP2P08253 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MMP2P08253 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
MMP2P08253 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP2P08253 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.29■□□□□ 0.84
MMP2P08253 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP2P08253 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP2P08253 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
MMP2P08253 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
MMP2P08253 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 TCF3P1-201ENST00000423021 1937 ntBASIC20.28■□□□□ 0.84
MMP2P08253 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.28■□□□□ 0.84
MMP2P08253 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.28■□□□□ 0.84
MMP2P08253 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.28■□□□□ 0.84
MMP2P08253 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.28■□□□□ 0.84
MMP2P08253 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP2P08253 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP2P08253 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP2P08253 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP2P08253 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP2P08253 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.27■□□□□ 0.84
MMP2P08253 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP2P08253 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms