Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC26.72■■□□□ 1.87
COL5A2P05997 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC26.72■■□□□ 1.87
COL5A2P05997 AC026271.3-201ENST00000571884 352 ntBASIC26.72■■□□□ 1.87
COL5A2P05997 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC26.72■■□□□ 1.87
COL5A2P05997 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC26.72■■□□□ 1.87
COL5A2P05997 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
COL5A2P05997 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL5A2P05997 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL5A2P05997 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
COL5A2P05997 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC26.71■■□□□ 1.87
COL5A2P05997 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.71■■□□□ 1.87
COL5A2P05997 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL5A2P05997 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL5A2P05997 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL5A2P05997 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
COL5A2P05997 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL5A2P05997 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL5A2P05997 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL5A2P05997 PRR31-201ENST00000371629 978 ntTSL 2 BASIC26.71■■□□□ 1.87
COL5A2P05997 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.71■■□□□ 1.87
COL5A2P05997 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC26.71■■□□□ 1.87
COL5A2P05997 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
COL5A2P05997 AC087388.1-201ENST00000571370 1112 ntBASIC26.71■■□□□ 1.87
COL5A2P05997 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.71■■□□□ 1.87
COL5A2P05997 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC26.71■■□□□ 1.87
COL5A2P05997 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.7■■□□□ 1.87
COL5A2P05997 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.87
COL5A2P05997 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.7■■□□□ 1.87
COL5A2P05997 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
COL5A2P05997 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC26.7■■□□□ 1.87
COL5A2P05997 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
COL5A2P05997 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
COL5A2P05997 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC26.7■■□□□ 1.86
COL5A2P05997 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC26.7■■□□□ 1.86
COL5A2P05997 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
COL5A2P05997 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL5A2P05997 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL5A2P05997 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.7■■□□□ 1.86
COL5A2P05997 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL5A2P05997 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
COL5A2P05997 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL5A2P05997 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
COL5A2P05997 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL5A2P05997 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL5A2P05997 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL5A2P05997 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL5A2P05997 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL5A2P05997 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL5A2P05997 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC26.69■■□□□ 1.86
COL5A2P05997 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC26.69■■□□□ 1.86
COL5A2P05997 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL5A2P05997 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC26.69■■□□□ 1.86
COL5A2P05997 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL5A2P05997 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL5A2P05997 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
COL5A2P05997 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL5A2P05997 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC26.69■■□□□ 1.86
COL5A2P05997 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL5A2P05997 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC26.68■■□□□ 1.86
COL5A2P05997 AP005242.2-201ENST00000580065 1175 ntBASIC26.68■■□□□ 1.86
COL5A2P05997 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
COL5A2P05997 ABBA01031674.1-201ENST00000635145 728 ntBASIC26.68■■□□□ 1.86
COL5A2P05997 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL5A2P05997 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL5A2P05997 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL5A2P05997 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC26.68■■□□□ 1.86
COL5A2P05997 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL5A2P05997 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC26.68■■□□□ 1.86
COL5A2P05997 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC26.68■■□□□ 1.86
COL5A2P05997 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC26.68■■□□□ 1.86
COL5A2P05997 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL5A2P05997 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL5A2P05997 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.67■■□□□ 1.86
COL5A2P05997 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.67■■□□□ 1.86
COL5A2P05997 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL5A2P05997 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL5A2P05997 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.67■■□□□ 1.86
COL5A2P05997 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.67■■□□□ 1.86
COL5A2P05997 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC26.67■■□□□ 1.86
COL5A2P05997 LGALS8-AS1-201ENST00000487567 1457 ntBASIC26.67■■□□□ 1.86
COL5A2P05997 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL5A2P05997 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC26.67■■□□□ 1.86
COL5A2P05997 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL5A2P05997 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL5A2P05997 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC26.67■■□□□ 1.86
COL5A2P05997 DGCR10-201ENST00000609839 495 ntBASIC26.67■■□□□ 1.86
COL5A2P05997 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC26.67■■□□□ 1.86
COL5A2P05997 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL5A2P05997 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL5A2P05997 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.66■■□□□ 1.86
COL5A2P05997 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL5A2P05997 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC26.66■■□□□ 1.86
COL5A2P05997 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL5A2P05997 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL5A2P05997 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL5A2P05997 CLN6-221ENST00000637494 765 ntTSL 5 BASIC26.66■■□□□ 1.86
COL5A2P05997 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.66■■□□□ 1.86
COL5A2P05997 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.65■■□□□ 1.86
COL5A2P05997 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL5A2P05997 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms