Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZBED1O96006 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.25■□□□□ 0.99
ZBED1O96006 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZBED1O96006 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZBED1O96006 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZBED1O96006 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZBED1O96006 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.24■□□□□ 0.99
ZBED1O96006 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.24■□□□□ 0.99
ZBED1O96006 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ZBED1O96006 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZBED1O96006 AC073130.3-201ENST00000624389 2278 ntBASIC21.24■□□□□ 0.99
ZBED1O96006 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZBED1O96006 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ZBED1O96006 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZBED1O96006 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.24■□□□□ 0.99
ZBED1O96006 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.24■□□□□ 0.99
ZBED1O96006 HLA-B-256ENST00000639848 1089 ntBASIC21.24■□□□□ 0.99
ZBED1O96006 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.24■□□□□ 0.99
ZBED1O96006 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.24■□□□□ 0.99
ZBED1O96006 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ZBED1O96006 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ZBED1O96006 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZBED1O96006 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.24■□□□□ 0.99
ZBED1O96006 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ZBED1O96006 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.23■□□□□ 0.99
ZBED1O96006 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.23■□□□□ 0.99
ZBED1O96006 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ZBED1O96006 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.23■□□□□ 0.99
ZBED1O96006 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.23■□□□□ 0.99
ZBED1O96006 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.23■□□□□ 0.99
ZBED1O96006 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZBED1O96006 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.23■□□□□ 0.99
ZBED1O96006 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ZBED1O96006 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.23■□□□□ 0.99
ZBED1O96006 AC073314.1-201ENST00000568729 2216 ntBASIC21.23■□□□□ 0.99
ZBED1O96006 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.22■□□□□ 0.99
ZBED1O96006 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZBED1O96006 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZBED1O96006 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZBED1O96006 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZBED1O96006 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.22■□□□□ 0.99
ZBED1O96006 AC092667.1-201ENST00000434301 2586 ntBASIC21.22■□□□□ 0.99
ZBED1O96006 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZBED1O96006 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZBED1O96006 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.22■□□□□ 0.99
ZBED1O96006 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZBED1O96006 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.22■□□□□ 0.99
ZBED1O96006 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.22■□□□□ 0.99
ZBED1O96006 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ZBED1O96006 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.22■□□□□ 0.99
ZBED1O96006 AP005212.1-201ENST00000581547 1997 ntBASIC21.22■□□□□ 0.99
ZBED1O96006 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
ZBED1O96006 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZBED1O96006 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.22■□□□□ 0.99
ZBED1O96006 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.22■□□□□ 0.99
ZBED1O96006 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZBED1O96006 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.22■□□□□ 0.99
ZBED1O96006 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.22■□□□□ 0.99
ZBED1O96006 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZBED1O96006 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZBED1O96006 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.21■□□□□ 0.99
ZBED1O96006 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZBED1O96006 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.21■□□□□ 0.99
ZBED1O96006 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZBED1O96006 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
ZBED1O96006 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.21■□□□□ 0.99
ZBED1O96006 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZBED1O96006 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.21■□□□□ 0.99
ZBED1O96006 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.21■□□□□ 0.99
ZBED1O96006 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.21■□□□□ 0.99
ZBED1O96006 AC060766.5-201ENST00000590539 871 ntBASIC21.21■□□□□ 0.99
ZBED1O96006 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZBED1O96006 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZBED1O96006 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZBED1O96006 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.21■□□□□ 0.99
ZBED1O96006 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
ZBED1O96006 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZBED1O96006 GABARAPL3-202ENST00000624044 1851 ntBASIC21.2■□□□□ 0.98
ZBED1O96006 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZBED1O96006 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.2■□□□□ 0.98
ZBED1O96006 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZBED1O96006 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ZBED1O96006 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZBED1O96006 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZBED1O96006 AC092720.2-201ENST00000602388 1665 ntBASIC21.2■□□□□ 0.98
ZBED1O96006 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZBED1O96006 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZBED1O96006 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms