Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF1O95521 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF1O95521 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF1O95521 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PRAMEF1O95521 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF1O95521 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.04■□□□□ 0.8
PRAMEF1O95521 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.04■□□□□ 0.8
PRAMEF1O95521 MYC-209ENST00000641252 345 ntBASIC20.04■□□□□ 0.8
PRAMEF1O95521 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF1O95521 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF1O95521 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.04■□□□□ 0.8
PRAMEF1O95521 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEF1O95521 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF1O95521 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PRAMEF1O95521 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PRAMEF1O95521 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.04■□□□□ 0.8
PRAMEF1O95521 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF1O95521 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF1O95521 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF1O95521 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF1O95521 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF1O95521 PTBP1P-201ENST00000554374 1601 ntBASIC20.03■□□□□ 0.8
PRAMEF1O95521 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF1O95521 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.03■□□□□ 0.8
PRAMEF1O95521 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.03■□□□□ 0.8
PRAMEF1O95521 AC097658.1-201ENST00000475555 843 ntBASIC20.03■□□□□ 0.8
PRAMEF1O95521 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PRAMEF1O95521 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.03■□□□□ 0.8
PRAMEF1O95521 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF1O95521 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF1O95521 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF1O95521 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF1O95521 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.03■□□□□ 0.8
PRAMEF1O95521 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF1O95521 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF1O95521 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF1O95521 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF1O95521 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF1O95521 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF1O95521 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF1O95521 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF1O95521 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF1O95521 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PRAMEF1O95521 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF1O95521 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAMEF1O95521 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.02■□□□□ 0.8
PRAMEF1O95521 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAMEF1O95521 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF1O95521 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAMEF1O95521 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PRAMEF1O95521 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PRAMEF1O95521 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
PRAMEF1O95521 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.02■□□□□ 0.79
PRAMEF1O95521 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF1O95521 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PRAMEF1O95521 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF1O95521 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF1O95521 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF1O95521 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEF1O95521 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF1O95521 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.01■□□□□ 0.79
PRAMEF1O95521 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF1O95521 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.01■□□□□ 0.79
PRAMEF1O95521 AC083880.1-201ENST00000608266 535 ntBASIC20.01■□□□□ 0.79
PRAMEF1O95521 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEF1O95521 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF1O95521 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF1O95521 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF1O95521 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF1O95521 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF1O95521 AL391422.3-201ENST00000603791 2761 ntBASIC20■□□□□ 0.79
PRAMEF1O95521 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF1O95521 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20■□□□□ 0.79
PRAMEF1O95521 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF1O95521 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF1O95521 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20■□□□□ 0.79
PRAMEF1O95521 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20■□□□□ 0.79
PRAMEF1O95521 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF1O95521 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
PRAMEF1O95521 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF1O95521 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.99■□□□□ 0.79
PRAMEF1O95521 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEF1O95521 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
PRAMEF1O95521 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF1O95521 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms