Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RAPGEF3O95398 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC30.46■■■□□ 2.47
RAPGEF3O95398 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RAPGEF3O95398 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC30.46■■■□□ 2.47
RAPGEF3O95398 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC30.46■■■□□ 2.47
RAPGEF3O95398 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
RAPGEF3O95398 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
RAPGEF3O95398 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
RAPGEF3O95398 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
RAPGEF3O95398 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RAPGEF3O95398 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
RAPGEF3O95398 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
RAPGEF3O95398 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
RAPGEF3O95398 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC30.45■■■□□ 2.47
RAPGEF3O95398 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC30.45■■■□□ 2.47
RAPGEF3O95398 AL138966.2-201ENST00000621997 464 ntBASIC30.45■■■□□ 2.47
RAPGEF3O95398 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
RAPGEF3O95398 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
RAPGEF3O95398 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC30.44■■■□□ 2.46
RAPGEF3O95398 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC30.44■■■□□ 2.46
RAPGEF3O95398 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
RAPGEF3O95398 RNF152P1-201ENST00000397754 604 ntBASIC30.44■■■□□ 2.46
RAPGEF3O95398 PPP1R14BP5-201ENST00000440334 435 ntBASIC30.44■■■□□ 2.46
RAPGEF3O95398 B3GAT3P1-201ENST00000471720 806 ntBASIC30.44■■■□□ 2.46
RAPGEF3O95398 AC011506.1-201ENST00000474329 610 ntBASIC30.44■■■□□ 2.46
RAPGEF3O95398 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC30.44■■■□□ 2.46
RAPGEF3O95398 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RAPGEF3O95398 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC30.44■■■□□ 2.46
RAPGEF3O95398 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
RAPGEF3O95398 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
RAPGEF3O95398 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC30.44■■■□□ 2.46
RAPGEF3O95398 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RAPGEF3O95398 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RAPGEF3O95398 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RAPGEF3O95398 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RAPGEF3O95398 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RAPGEF3O95398 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 FAM86EP-206ENST00000510506 987 ntBASIC30.43■■■□□ 2.46
RAPGEF3O95398 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RAPGEF3O95398 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RAPGEF3O95398 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
RAPGEF3O95398 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC30.42■■■□□ 2.46
RAPGEF3O95398 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
RAPGEF3O95398 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
RAPGEF3O95398 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RAPGEF3O95398 AC127496.7-201ENST00000625110 1798 ntBASIC30.42■■■□□ 2.46
RAPGEF3O95398 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
RAPGEF3O95398 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC30.42■■■□□ 2.46
RAPGEF3O95398 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC30.42■■■□□ 2.46
RAPGEF3O95398 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC30.42■■■□□ 2.46
RAPGEF3O95398 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
RAPGEF3O95398 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RAPGEF3O95398 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
RAPGEF3O95398 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC30.42■■■□□ 2.46
RAPGEF3O95398 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RAPGEF3O95398 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RAPGEF3O95398 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RAPGEF3O95398 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RAPGEF3O95398 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC30.41■■■□□ 2.46
RAPGEF3O95398 PCED1CP-201ENST00000419887 785 ntBASIC30.41■■■□□ 2.46
RAPGEF3O95398 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC30.41■■■□□ 2.46
RAPGEF3O95398 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC30.41■■■□□ 2.46
RAPGEF3O95398 AC128688.1-201ENST00000487626 519 ntBASIC30.41■■■□□ 2.46
RAPGEF3O95398 DBP-204ENST00000599385 709 ntTSL 3 BASIC30.41■■■□□ 2.46
RAPGEF3O95398 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RAPGEF3O95398 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC30.41■■■□□ 2.46
RAPGEF3O95398 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
RAPGEF3O95398 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC30.41■■■□□ 2.46
RAPGEF3O95398 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC30.4■■■□□ 2.46
RAPGEF3O95398 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RAPGEF3O95398 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC30.4■■■□□ 2.46
RAPGEF3O95398 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC30.4■■■□□ 2.46
RAPGEF3O95398 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC30.4■■■□□ 2.46
RAPGEF3O95398 YBX1P2-201ENST00000489612 999 ntBASIC30.4■■■□□ 2.46
RAPGEF3O95398 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
RAPGEF3O95398 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC30.4■■■□□ 2.46
RAPGEF3O95398 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
RAPGEF3O95398 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RAPGEF3O95398 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
RAPGEF3O95398 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
RAPGEF3O95398 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC30.39■■■□□ 2.46
RAPGEF3O95398 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RAPGEF3O95398 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
RAPGEF3O95398 AC097488.1-201ENST00000507834 756 ntBASIC30.39■■■□□ 2.46
RAPGEF3O95398 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC30.39■■■□□ 2.46
RAPGEF3O95398 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC30.39■■■□□ 2.46
RAPGEF3O95398 AC026271.3-201ENST00000571884 352 ntBASIC30.39■■■□□ 2.46
RAPGEF3O95398 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC30.39■■■□□ 2.46
RAPGEF3O95398 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC30.39■■■□□ 2.46
RAPGEF3O95398 DGCR10-201ENST00000609839 495 ntBASIC30.39■■■□□ 2.46
RAPGEF3O95398 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.39■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms