Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAF4O95104 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SCAF4O95104 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAF4O95104 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCAF4O95104 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAF4O95104 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAF4O95104 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAF4O95104 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SCAF4O95104 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCAF4O95104 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
SCAF4O95104 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCAF4O95104 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAF4O95104 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAF4O95104 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAF4O95104 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
SCAF4O95104 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SCAF4O95104 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAF4O95104 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 AC099778.1-201ENST00000568593 1911 ntBASIC16.41■□□□□ 0.22
SCAF4O95104 AC055733.4-201ENST00000638462 1354 ntBASIC16.41■□□□□ 0.22
SCAF4O95104 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 IRS3P-201ENST00000223076 1006 ntBASIC16.41■□□□□ 0.22
SCAF4O95104 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAF4O95104 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAF4O95104 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAF4O95104 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SCAF4O95104 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SCAF4O95104 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SCAF4O95104 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 AC004408.2-201ENST00000623613 2777 ntBASIC16.41■□□□□ 0.22
SCAF4O95104 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SCAF4O95104 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAF4O95104 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAF4O95104 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.4■□□□□ 0.22
SCAF4O95104 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAF4O95104 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAF4O95104 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAF4O95104 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAF4O95104 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.4■□□□□ 0.22
SCAF4O95104 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.4■□□□□ 0.22
SCAF4O95104 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAF4O95104 SMUG1P1-201ENST00000590640 811 ntBASIC16.4■□□□□ 0.22
SCAF4O95104 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAF4O95104 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAF4O95104 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAF4O95104 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAF4O95104 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SCAF4O95104 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAF4O95104 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAF4O95104 BX005040.4-201ENST00000637145 1518 ntBASIC16.4■□□□□ 0.22
SCAF4O95104 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SCAF4O95104 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SCAF4O95104 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAF4O95104 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.39■□□□□ 0.21
SCAF4O95104 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAF4O95104 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAF4O95104 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SCAF4O95104 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SCAF4O95104 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.38■□□□□ 0.21
SCAF4O95104 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAF4O95104 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SCAF4O95104 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.38■□□□□ 0.21
SCAF4O95104 LETM1P2-201ENST00000597330 2178 ntBASIC16.38■□□□□ 0.21
SCAF4O95104 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAF4O95104 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms