Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KDM4BO94953 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.61■□□□□ 0.41
KDM4BO94953 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.61■□□□□ 0.41
KDM4BO94953 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
KDM4BO94953 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
KDM4BO94953 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
KDM4BO94953 MIR638-201ENST00000385237 100 ntBASIC17.61■□□□□ 0.41
KDM4BO94953 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KDM4BO94953 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KDM4BO94953 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.61■□□□□ 0.41
KDM4BO94953 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.61■□□□□ 0.41
KDM4BO94953 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.61■□□□□ 0.41
KDM4BO94953 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KDM4BO94953 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KDM4BO94953 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.61■□□□□ 0.41
KDM4BO94953 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
KDM4BO94953 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KDM4BO94953 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDM4BO94953 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.6■□□□□ 0.41
KDM4BO94953 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDM4BO94953 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDM4BO94953 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDM4BO94953 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.6■□□□□ 0.41
KDM4BO94953 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.6■□□□□ 0.41
KDM4BO94953 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.6■□□□□ 0.41
KDM4BO94953 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDM4BO94953 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.6■□□□□ 0.41
KDM4BO94953 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDM4BO94953 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.6■□□□□ 0.41
KDM4BO94953 SMG8-203ENST00000578922 2178 ntBASIC17.6■□□□□ 0.41
KDM4BO94953 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.6■□□□□ 0.41
KDM4BO94953 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
KDM4BO94953 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDM4BO94953 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDM4BO94953 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDM4BO94953 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDM4BO94953 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDM4BO94953 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDM4BO94953 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.59■□□□□ 0.41
KDM4BO94953 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KDM4BO94953 LINC02228-203ENST00000641970 1355 ntBASIC17.59■□□□□ 0.41
KDM4BO94953 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.59■□□□□ 0.41
KDM4BO94953 AC138907.5-202ENST00000569484 235 ntBASIC17.59■□□□□ 0.41
KDM4BO94953 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KDM4BO94953 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KDM4BO94953 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KDM4BO94953 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KDM4BO94953 AC116562.4-201ENST00000641316 2276 ntBASIC17.59■□□□□ 0.41
KDM4BO94953 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDM4BO94953 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDM4BO94953 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.59■□□□□ 0.41
KDM4BO94953 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDM4BO94953 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
KDM4BO94953 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
KDM4BO94953 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
KDM4BO94953 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
KDM4BO94953 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KDM4BO94953 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KDM4BO94953 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KDM4BO94953 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KDM4BO94953 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KDM4BO94953 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
KDM4BO94953 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KDM4BO94953 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KDM4BO94953 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.58■□□□□ 0.4
KDM4BO94953 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDM4BO94953 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDM4BO94953 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDM4BO94953 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KDM4BO94953 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.58■□□□□ 0.4
KDM4BO94953 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.58■□□□□ 0.4
KDM4BO94953 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.58■□□□□ 0.4
KDM4BO94953 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDM4BO94953 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
KDM4BO94953 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
KDM4BO94953 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDM4BO94953 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDM4BO94953 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.57■□□□□ 0.4
KDM4BO94953 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
KDM4BO94953 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KDM4BO94953 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM4BO94953 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KDM4BO94953 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM4BO94953 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM4BO94953 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM4BO94953 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM4BO94953 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KDM4BO94953 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM4BO94953 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.57■□□□□ 0.4
KDM4BO94953 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.57■□□□□ 0.4
KDM4BO94953 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.57■□□□□ 0.4
KDM4BO94953 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM4BO94953 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.57■□□□□ 0.4
KDM4BO94953 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KDM4BO94953 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KDM4BO94953 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KDM4BO94953 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM4BO94953 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KDM4BO94953 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KDM4BO94953 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms