Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.05■□□□□ 0.48
PFDN1O60925 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
PFDN1O60925 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PFDN1O60925 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PFDN1O60925 AC141586.5-201ENST00000624546 2050 ntBASIC18.05■□□□□ 0.48
PFDN1O60925 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.05■□□□□ 0.48
PFDN1O60925 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PFDN1O60925 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.05■□□□□ 0.48
PFDN1O60925 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.04■□□□□ 0.48
PFDN1O60925 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
PFDN1O60925 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PFDN1O60925 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 PKD1P5-201ENST00000532415 10291 ntBASIC18.04■□□□□ 0.48
PFDN1O60925 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PFDN1O60925 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PFDN1O60925 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PFDN1O60925 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 Z82202.1-201ENST00000623446 1880 ntBASIC18.03■□□□□ 0.48
PFDN1O60925 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PFDN1O60925 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PFDN1O60925 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.03■□□□□ 0.48
PFDN1O60925 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PFDN1O60925 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PFDN1O60925 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PFDN1O60925 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.02■□□□□ 0.48
PFDN1O60925 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.02■□□□□ 0.48
PFDN1O60925 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
PFDN1O60925 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.02■□□□□ 0.48
PFDN1O60925 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN1O60925 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.47
PFDN1O60925 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PFDN1O60925 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PFDN1O60925 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PFDN1O60925 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PFDN1O60925 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PFDN1O60925 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PFDN1O60925 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PFDN1O60925 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.01■□□□□ 0.47
PFDN1O60925 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.01■□□□□ 0.47
PFDN1O60925 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.01■□□□□ 0.47
PFDN1O60925 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.01■□□□□ 0.47
PFDN1O60925 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN1O60925 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PFDN1O60925 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.01■□□□□ 0.47
PFDN1O60925 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PFDN1O60925 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms