Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
HCN1O60741 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.75■□□□□ 0.59
HCN1O60741 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HCN1O60741 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.75■□□□□ 0.59
HCN1O60741 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.75■□□□□ 0.59
HCN1O60741 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.75■□□□□ 0.59
HCN1O60741 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.75■□□□□ 0.59
HCN1O60741 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
HCN1O60741 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.75■□□□□ 0.59
HCN1O60741 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.75■□□□□ 0.59
HCN1O60741 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HCN1O60741 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.75■□□□□ 0.59
HCN1O60741 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HCN1O60741 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
HCN1O60741 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCN1O60741 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCN1O60741 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HCN1O60741 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCN1O60741 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HCN1O60741 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.74■□□□□ 0.59
HCN1O60741 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCN1O60741 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HCN1O60741 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.74■□□□□ 0.59
HCN1O60741 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HCN1O60741 AC098934.4-201ENST00000564127 592 ntBASIC18.74■□□□□ 0.59
HCN1O60741 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCN1O60741 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
HCN1O60741 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCN1O60741 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.74■□□□□ 0.59
HCN1O60741 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCN1O60741 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HCN1O60741 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HCN1O60741 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCN1O60741 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.73■□□□□ 0.59
HCN1O60741 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCN1O60741 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
HCN1O60741 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.73■□□□□ 0.59
HCN1O60741 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCN1O60741 ABHD17AP1-201ENST00000358206 933 ntBASIC18.73■□□□□ 0.59
HCN1O60741 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.73■□□□□ 0.59
HCN1O60741 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.73■□□□□ 0.59
HCN1O60741 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HCN1O60741 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.73■□□□□ 0.59
HCN1O60741 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HCN1O60741 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HCN1O60741 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HCN1O60741 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCN1O60741 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HCN1O60741 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HCN1O60741 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.73■□□□□ 0.59
HCN1O60741 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCN1O60741 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCN1O60741 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HCN1O60741 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCN1O60741 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.72■□□□□ 0.59
HCN1O60741 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCN1O60741 AC011484.1-201ENST00000377652 1995 ntBASIC18.72■□□□□ 0.59
HCN1O60741 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCN1O60741 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.72■□□□□ 0.59
HCN1O60741 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCN1O60741 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.72■□□□□ 0.59
HCN1O60741 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.72■□□□□ 0.59
HCN1O60741 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HCN1O60741 AC027702.1-201ENST00000563810 1770 ntBASIC18.72■□□□□ 0.59
HCN1O60741 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.72■□□□□ 0.59
HCN1O60741 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HCN1O60741 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
HCN1O60741 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCN1O60741 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HCN1O60741 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.71■□□□□ 0.59
HCN1O60741 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCN1O60741 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
HCN1O60741 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HCN1O60741 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.71■□□□□ 0.59
HCN1O60741 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
HCN1O60741 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HCN1O60741 AC097658.1-201ENST00000475555 843 ntBASIC18.71■□□□□ 0.59
HCN1O60741 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.71■□□□□ 0.59
HCN1O60741 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.71■□□□□ 0.59
HCN1O60741 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.71■□□□□ 0.59
HCN1O60741 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCN1O60741 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HCN1O60741 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.71■□□□□ 0.59
HCN1O60741 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HCN1O60741 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCN1O60741 AC020907.5-201ENST00000624372 1936 ntBASIC18.7■□□□□ 0.58
HCN1O60741 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HCN1O60741 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCN1O60741 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms