Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN3O60637 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN3O60637 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN3O60637 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN3O60637 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TSPAN3O60637 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN3O60637 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.75■□□□□ 0.91
TSPAN3O60637 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TSPAN3O60637 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TSPAN3O60637 POM121L13P-201ENST00000422362 380 ntBASIC20.75■□□□□ 0.91
TSPAN3O60637 GCSHP5-201ENST00000443090 522 ntBASIC20.75■□□□□ 0.91
TSPAN3O60637 AC093827.2-201ENST00000512654 315 ntBASIC20.75■□□□□ 0.91
TSPAN3O60637 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN3O60637 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.75■□□□□ 0.91
TSPAN3O60637 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TSPAN3O60637 AC120498.8-201ENST00000614275 531 ntBASIC20.75■□□□□ 0.91
TSPAN3O60637 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.75■□□□□ 0.91
TSPAN3O60637 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN3O60637 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN3O60637 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.75■□□□□ 0.91
TSPAN3O60637 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.75■□□□□ 0.91
TSPAN3O60637 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TSPAN3O60637 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.75■□□□□ 0.91
TSPAN3O60637 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TSPAN3O60637 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN3O60637 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN3O60637 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN3O60637 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.74■□□□□ 0.91
TSPAN3O60637 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.74■□□□□ 0.91
TSPAN3O60637 AC069544.1-201ENST00000609399 999 ntBASIC20.74■□□□□ 0.91
TSPAN3O60637 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN3O60637 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN3O60637 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN3O60637 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN3O60637 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN3O60637 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TSPAN3O60637 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN3O60637 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN3O60637 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.74■□□□□ 0.91
TSPAN3O60637 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TSPAN3O60637 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.73■□□□□ 0.91
TSPAN3O60637 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TSPAN3O60637 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.73■□□□□ 0.91
TSPAN3O60637 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.73■□□□□ 0.91
TSPAN3O60637 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.73■□□□□ 0.91
TSPAN3O60637 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TSPAN3O60637 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TSPAN3O60637 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.73■□□□□ 0.91
TSPAN3O60637 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.73■□□□□ 0.91
TSPAN3O60637 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TSPAN3O60637 C1QBPP2-201ENST00000528754 825 ntBASIC20.73■□□□□ 0.91
TSPAN3O60637 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TSPAN3O60637 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TSPAN3O60637 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.73■□□□□ 0.91
TSPAN3O60637 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.73■□□□□ 0.91
TSPAN3O60637 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN3O60637 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.72■□□□□ 0.91
TSPAN3O60637 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.72■□□□□ 0.91
TSPAN3O60637 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.72■□□□□ 0.91
TSPAN3O60637 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.72■□□□□ 0.91
TSPAN3O60637 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.72■□□□□ 0.91
TSPAN3O60637 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 DPP3P2-201ENST00000416030 1696 ntBASIC20.72■□□□□ 0.91
TSPAN3O60637 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.72■□□□□ 0.91
TSPAN3O60637 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN3O60637 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms