Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.55■□□□□ 0.88
SYNCRIPO60506 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.55■□□□□ 0.88
SYNCRIPO60506 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SYNCRIPO60506 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
SYNCRIPO60506 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SYNCRIPO60506 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SYNCRIPO60506 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNCRIPO60506 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SYNCRIPO60506 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYNCRIPO60506 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNCRIPO60506 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNCRIPO60506 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNCRIPO60506 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNCRIPO60506 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.54■□□□□ 0.88
SYNCRIPO60506 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNCRIPO60506 AC120498.8-201ENST00000614275 531 ntBASIC20.54■□□□□ 0.88
SYNCRIPO60506 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNCRIPO60506 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNCRIPO60506 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNCRIPO60506 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNCRIPO60506 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNCRIPO60506 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNCRIPO60506 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNCRIPO60506 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNCRIPO60506 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.53■□□□□ 0.88
SYNCRIPO60506 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SYNCRIPO60506 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNCRIPO60506 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SYNCRIPO60506 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNCRIPO60506 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.52■□□□□ 0.88
SYNCRIPO60506 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.52■□□□□ 0.88
SYNCRIPO60506 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.52■□□□□ 0.88
SYNCRIPO60506 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNCRIPO60506 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNCRIPO60506 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNCRIPO60506 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SYNCRIPO60506 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.52■□□□□ 0.87
SYNCRIPO60506 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYNCRIPO60506 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.52■□□□□ 0.87
SYNCRIPO60506 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SYNCRIPO60506 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYNCRIPO60506 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SYNCRIPO60506 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNCRIPO60506 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNCRIPO60506 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms