Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LCMT2O60294 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.27■□□□□ 0.68
LCMT2O60294 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCMT2O60294 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LCMT2O60294 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.27■□□□□ 0.67
LCMT2O60294 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
LCMT2O60294 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
LCMT2O60294 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.26■□□□□ 0.67
LCMT2O60294 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
LCMT2O60294 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.26■□□□□ 0.67
LCMT2O60294 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.26■□□□□ 0.67
LCMT2O60294 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.26■□□□□ 0.67
LCMT2O60294 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LCMT2O60294 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
LCMT2O60294 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LCMT2O60294 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCMT2O60294 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCMT2O60294 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LCMT2O60294 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.25■□□□□ 0.67
LCMT2O60294 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCMT2O60294 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LCMT2O60294 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.25■□□□□ 0.67
LCMT2O60294 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LCMT2O60294 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LCMT2O60294 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LCMT2O60294 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LCMT2O60294 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCMT2O60294 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.25■□□□□ 0.67
LCMT2O60294 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.25■□□□□ 0.67
LCMT2O60294 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCMT2O60294 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LCMT2O60294 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCMT2O60294 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCMT2O60294 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.24■□□□□ 0.67
LCMT2O60294 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.24■□□□□ 0.67
LCMT2O60294 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCMT2O60294 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
LCMT2O60294 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCMT2O60294 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCMT2O60294 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.24■□□□□ 0.67
LCMT2O60294 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.24■□□□□ 0.67
LCMT2O60294 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.24■□□□□ 0.67
LCMT2O60294 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.24■□□□□ 0.67
LCMT2O60294 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.24■□□□□ 0.67
LCMT2O60294 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.24■□□□□ 0.67
LCMT2O60294 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCMT2O60294 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCMT2O60294 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCMT2O60294 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCMT2O60294 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LCMT2O60294 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
LCMT2O60294 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
LCMT2O60294 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCMT2O60294 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCMT2O60294 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.23■□□□□ 0.67
LCMT2O60294 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.23■□□□□ 0.67
LCMT2O60294 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LCMT2O60294 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LCMT2O60294 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCMT2O60294 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.23■□□□□ 0.67
LCMT2O60294 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LCMT2O60294 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 AC099778.1-201ENST00000568593 1911 ntBASIC19.22■□□□□ 0.67
LCMT2O60294 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.22■□□□□ 0.67
LCMT2O60294 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.22■□□□□ 0.67
LCMT2O60294 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.22■□□□□ 0.67
LCMT2O60294 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LCMT2O60294 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 KRT8P17-201ENST00000453110 1448 ntBASIC19.22■□□□□ 0.67
LCMT2O60294 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms