Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CHMP2AO43633 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP2AO43633 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP2AO43633 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP2AO43633 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.65■■□□□ 1.22
CHMP2AO43633 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.65■■□□□ 1.22
CHMP2AO43633 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CHMP2AO43633 UNC93B4-201ENST00000505679 747 ntBASIC22.65■■□□□ 1.22
CHMP2AO43633 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP2AO43633 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.65■■□□□ 1.22
CHMP2AO43633 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.65■■□□□ 1.22
CHMP2AO43633 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP2AO43633 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.65■■□□□ 1.22
CHMP2AO43633 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP2AO43633 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.65■■□□□ 1.22
CHMP2AO43633 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.65■■□□□ 1.22
CHMP2AO43633 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP2AO43633 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP2AO43633 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHMP2AO43633 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CHMP2AO43633 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHMP2AO43633 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHMP2AO43633 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CHMP2AO43633 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CHMP2AO43633 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CHMP2AO43633 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHMP2AO43633 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHMP2AO43633 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHMP2AO43633 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.64■■□□□ 1.21
CHMP2AO43633 AC005829.2-201ENST00000571422 1056 ntBASIC22.64■■□□□ 1.21
CHMP2AO43633 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHMP2AO43633 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CHMP2AO43633 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.64■■□□□ 1.21
CHMP2AO43633 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.64■■□□□ 1.21
CHMP2AO43633 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.64■■□□□ 1.21
CHMP2AO43633 AC073314.1-201ENST00000568729 2216 ntBASIC22.63■■□□□ 1.21
CHMP2AO43633 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CHMP2AO43633 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.63■■□□□ 1.21
CHMP2AO43633 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.63■■□□□ 1.21
CHMP2AO43633 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 KRT18P29-201ENST00000397031 1267 ntBASIC22.63■■□□□ 1.21
CHMP2AO43633 AL390719.1-204ENST00000412397 1219 ntBASIC22.63■■□□□ 1.21
CHMP2AO43633 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.63■■□□□ 1.21
CHMP2AO43633 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CHMP2AO43633 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.63■■□□□ 1.21
CHMP2AO43633 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.63■■□□□ 1.21
CHMP2AO43633 SMG8-203ENST00000578922 2178 ntBASIC22.63■■□□□ 1.21
CHMP2AO43633 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP2AO43633 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP2AO43633 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP2AO43633 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.62■■□□□ 1.21
CHMP2AO43633 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP2AO43633 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP2AO43633 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP2AO43633 PTBP1P-201ENST00000554374 1601 ntBASIC22.62■■□□□ 1.21
CHMP2AO43633 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP2AO43633 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.62■■□□□ 1.21
CHMP2AO43633 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.62■■□□□ 1.21
CHMP2AO43633 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.62■■□□□ 1.21
CHMP2AO43633 TMEM191A-211ENST00000637163 1067 ntBASIC22.62■■□□□ 1.21
CHMP2AO43633 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP2AO43633 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP2AO43633 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP2AO43633 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP2AO43633 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP2AO43633 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP2AO43633 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.61■■□□□ 1.21
CHMP2AO43633 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CHMP2AO43633 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CHMP2AO43633 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP2AO43633 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP2AO43633 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.61■■□□□ 1.21
CHMP2AO43633 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP2AO43633 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.61■■□□□ 1.21
CHMP2AO43633 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CHMP2AO43633 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CHMP2AO43633 ITM2C-210ENST00000620962 501 ntBASIC22.61■■□□□ 1.21
CHMP2AO43633 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP2AO43633 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
CHMP2AO43633 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.61■■□□□ 1.21
CHMP2AO43633 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP2AO43633 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CHMP2AO43633 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP2AO43633 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP2AO43633 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP2AO43633 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP2AO43633 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.6■■□□□ 1.21
CHMP2AO43633 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.6■■□□□ 1.21
CHMP2AO43633 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CHMP2AO43633 AC128676.1-201ENST00000454392 318 ntBASIC22.6■■□□□ 1.21
CHMP2AO43633 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms