Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SNAI2O43623 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.99□□□□□ -0.01
SNAI2O43623 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.99□□□□□ -0.01
SNAI2O43623 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.99□□□□□ -0.01
SNAI2O43623 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.99□□□□□ -0.01
SNAI2O43623 AC126544.1-201ENST00000580842 1059 ntBASIC14.99□□□□□ -0.01
SNAI2O43623 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.99□□□□□ -0.01
SNAI2O43623 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.99□□□□□ -0.01
SNAI2O43623 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.99□□□□□ -0.01
SNAI2O43623 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SNAI2O43623 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.99□□□□□ -0.01
SNAI2O43623 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNAI2O43623 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SNAI2O43623 LTB4R2-202ENST00000528054 3092 ntBASIC14.98□□□□□ -0.01
SNAI2O43623 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SNAI2O43623 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
SNAI2O43623 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SNAI2O43623 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.98□□□□□ -0.01
SNAI2O43623 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.98□□□□□ -0.01
SNAI2O43623 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SNAI2O43623 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.98□□□□□ -0.01
SNAI2O43623 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.98□□□□□ -0.01
SNAI2O43623 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.98□□□□□ -0.01
SNAI2O43623 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.98□□□□□ -0.01
SNAI2O43623 MIR4767-201ENST00000582827 78 ntBASIC14.98□□□□□ -0.01
SNAI2O43623 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.98□□□□□ -0.01
SNAI2O43623 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.98□□□□□ -0.01
SNAI2O43623 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.98□□□□□ -0.01
SNAI2O43623 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.98□□□□□ -0.01
SNAI2O43623 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
SNAI2O43623 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.98□□□□□ -0.01
SNAI2O43623 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNAI2O43623 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.98□□□□□ -0.01
SNAI2O43623 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.97□□□□□ -0.01
SNAI2O43623 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.97□□□□□ -0.01
SNAI2O43623 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.97□□□□□ -0.01
SNAI2O43623 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SNAI2O43623 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.97□□□□□ -0.01
SNAI2O43623 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.97□□□□□ -0.01
SNAI2O43623 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.97□□□□□ -0.01
SNAI2O43623 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 AC131281.2-201ENST00000520478 145 ntBASIC14.97□□□□□ -0.01
SNAI2O43623 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 AC105233.4-201ENST00000642045 216 ntBASIC14.97□□□□□ -0.01
SNAI2O43623 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SNAI2O43623 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.97□□□□□ -0.01
SNAI2O43623 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SNAI2O43623 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNAI2O43623 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNAI2O43623 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.96□□□□□ -0.01
SNAI2O43623 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms