Protein–RNA interactions for Protein: O15446

CD3EAP, DNA-directed RNA polymerase I subunit RPA34, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3EAPO15446 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CD3EAPO15446 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CD3EAPO15446 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD3EAPO15446 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD3EAPO15446 AC133552.2-202ENST00000575694 574 ntBASIC20.1■□□□□ 0.81
CD3EAPO15446 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD3EAPO15446 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD3EAPO15446 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD3EAPO15446 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.1■□□□□ 0.81
CD3EAPO15446 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CD3EAPO15446 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.1■□□□□ 0.81
CD3EAPO15446 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD3EAPO15446 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD3EAPO15446 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.1■□□□□ 0.81
CD3EAPO15446 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD3EAPO15446 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CD3EAPO15446 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3EAPO15446 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.09■□□□□ 0.81
CD3EAPO15446 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CD3EAPO15446 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3EAPO15446 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.09■□□□□ 0.81
CD3EAPO15446 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.09■□□□□ 0.81
CD3EAPO15446 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3EAPO15446 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD3EAPO15446 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3EAPO15446 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3EAPO15446 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3EAPO15446 RAP2CP1-201ENST00000605103 478 ntBASIC20.09■□□□□ 0.81
CD3EAPO15446 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CD3EAPO15446 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.09■□□□□ 0.81
CD3EAPO15446 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3EAPO15446 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3EAPO15446 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.09■□□□□ 0.81
CD3EAPO15446 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CD3EAPO15446 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CD3EAPO15446 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
CD3EAPO15446 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CD3EAPO15446 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.08■□□□□ 0.81
CD3EAPO15446 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD3EAPO15446 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD3EAPO15446 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CD3EAPO15446 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD3EAPO15446 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.08■□□□□ 0.81
CD3EAPO15446 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.08■□□□□ 0.81
CD3EAPO15446 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.08■□□□□ 0.81
CD3EAPO15446 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CD3EAPO15446 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CD3EAPO15446 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD3EAPO15446 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD3EAPO15446 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD3EAPO15446 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD3EAPO15446 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.08■□□□□ 0.8
CD3EAPO15446 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CD3EAPO15446 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD3EAPO15446 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CD3EAPO15446 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.07■□□□□ 0.8
CD3EAPO15446 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD3EAPO15446 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD3EAPO15446 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CD3EAPO15446 AL589743.5-201ENST00000616611 1050 ntBASIC20.07■□□□□ 0.8
CD3EAPO15446 AL050303.2-201ENST00000619798 666 ntBASIC20.07■□□□□ 0.8
CD3EAPO15446 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.07■□□□□ 0.8
CD3EAPO15446 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD3EAPO15446 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CD3EAPO15446 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD3EAPO15446 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.06■□□□□ 0.8
CD3EAPO15446 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD3EAPO15446 MIR663A-201ENST00000385250 93 ntBASIC20.06■□□□□ 0.8
CD3EAPO15446 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CD3EAPO15446 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.06■□□□□ 0.8
CD3EAPO15446 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CD3EAPO15446 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD3EAPO15446 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.06■□□□□ 0.8
CD3EAPO15446 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CD3EAPO15446 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CD3EAPO15446 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD3EAPO15446 TCF3P1-201ENST00000423021 1937 ntBASIC20.06■□□□□ 0.8
CD3EAPO15446 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.06■□□□□ 0.8
CD3EAPO15446 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD3EAPO15446 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD3EAPO15446 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD3EAPO15446 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD3EAPO15446 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CD3EAPO15446 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.05■□□□□ 0.8
CD3EAPO15446 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CD3EAPO15446 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD3EAPO15446 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CD3EAPO15446 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD3EAPO15446 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD3EAPO15446 CROCCP5-201ENST00000436658 830 ntBASIC20.05■□□□□ 0.8
CD3EAPO15446 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD3EAPO15446 AF201337.1-201ENST00000520239 748 ntBASIC20.05■□□□□ 0.8
CD3EAPO15446 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.05■□□□□ 0.8
CD3EAPO15446 AC105036.2-201ENST00000569468 176 ntBASIC20.05■□□□□ 0.8
CD3EAPO15446 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD3EAPO15446 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD3EAPO15446 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CD3EAPO15446 KRT17P1-201ENST00000399211 1546 ntBASIC20.05■□□□□ 0.8
CD3EAPO15446 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD3EAPO15446 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms