Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SPTLC1O15269 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SPTLC1O15269 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.56■■□□□ 1.04
SPTLC1O15269 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SPTLC1O15269 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.56■■□□□ 1.04
SPTLC1O15269 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SPTLC1O15269 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.56■■□□□ 1.04
SPTLC1O15269 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC1O15269 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.55■■□□□ 1.04
SPTLC1O15269 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.55■■□□□ 1.04
SPTLC1O15269 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SPTLC1O15269 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.55■■□□□ 1.04
SPTLC1O15269 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.55■■□□□ 1.04
SPTLC1O15269 AL390719.1-204ENST00000412397 1219 ntBASIC21.55■■□□□ 1.04
SPTLC1O15269 KRT17P3-201ENST00000420566 1262 ntBASIC21.55■■□□□ 1.04
SPTLC1O15269 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.55■■□□□ 1.04
SPTLC1O15269 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SPTLC1O15269 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.55■■□□□ 1.04
SPTLC1O15269 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SPTLC1O15269 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.55■■□□□ 1.04
SPTLC1O15269 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.55■■□□□ 1.04
SPTLC1O15269 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.55■■□□□ 1.04
SPTLC1O15269 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC1O15269 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.54■■□□□ 1.04
SPTLC1O15269 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPTLC1O15269 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPTLC1O15269 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPTLC1O15269 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
SPTLC1O15269 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPTLC1O15269 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPTLC1O15269 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.54■■□□□ 1.04
SPTLC1O15269 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.54■■□□□ 1.04
SPTLC1O15269 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPTLC1O15269 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.54■■□□□ 1.04
SPTLC1O15269 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPTLC1O15269 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.54■■□□□ 1.04
SPTLC1O15269 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SPTLC1O15269 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.54■■□□□ 1.04
SPTLC1O15269 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.53■■□□□ 1.04
SPTLC1O15269 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPTLC1O15269 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.53■■□□□ 1.04
SPTLC1O15269 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
SPTLC1O15269 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.53■■□□□ 1.04
SPTLC1O15269 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPTLC1O15269 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.53■■□□□ 1.04
SPTLC1O15269 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SPTLC1O15269 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.53■■□□□ 1.04
SPTLC1O15269 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.53■■□□□ 1.04
SPTLC1O15269 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SPTLC1O15269 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.53■■□□□ 1.04
SPTLC1O15269 RN7SL471P-201ENST00000580476 299 ntBASIC21.53■■□□□ 1.04
SPTLC1O15269 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.53■■□□□ 1.04
SPTLC1O15269 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SPTLC1O15269 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPTLC1O15269 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.53■■□□□ 1.04
SPTLC1O15269 DPP3P2-201ENST00000416030 1696 ntBASIC21.53■■□□□ 1.04
SPTLC1O15269 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SPTLC1O15269 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SPTLC1O15269 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.53■■□□□ 1.04
SPTLC1O15269 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPTLC1O15269 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPTLC1O15269 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPTLC1O15269 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SPTLC1O15269 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPTLC1O15269 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPTLC1O15269 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPTLC1O15269 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPTLC1O15269 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.52■■□□□ 1.04
SPTLC1O15269 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPTLC1O15269 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPTLC1O15269 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPTLC1O15269 AC124283.5-201ENST00000624661 1809 ntBASIC21.52■■□□□ 1.04
SPTLC1O15269 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPTLC1O15269 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SPTLC1O15269 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SPTLC1O15269 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.52■■□□□ 1.03
SPTLC1O15269 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms