Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH17O14917 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH17O14917 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH17O14917 AC105020.6-201ENST00000621523 1217 ntBASIC19.19■□□□□ 0.66
PCDH17O14917 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDH17O14917 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH17O14917 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH17O14917 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH17O14917 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH17O14917 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH17O14917 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH17O14917 KRT17P1-201ENST00000399211 1546 ntBASIC19.19■□□□□ 0.66
PCDH17O14917 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH17O14917 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH17O14917 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH17O14917 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH17O14917 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH17O14917 AC027702.1-201ENST00000563810 1770 ntBASIC19.19■□□□□ 0.66
PCDH17O14917 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH17O14917 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH17O14917 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PCDH17O14917 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDH17O14917 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDH17O14917 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDH17O14917 RNA5SP413-201ENST00000516373 109 ntBASIC19.18■□□□□ 0.66
PCDH17O14917 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDH17O14917 HLA-B-256ENST00000639848 1089 ntBASIC19.18■□□□□ 0.66
PCDH17O14917 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDH17O14917 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH17O14917 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH17O14917 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH17O14917 AL355472.2-201ENST00000422958 438 ntBASIC19.17■□□□□ 0.66
PCDH17O14917 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
PCDH17O14917 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDH17O14917 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH17O14917 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH17O14917 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH17O14917 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH17O14917 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH17O14917 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH17O14917 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH17O14917 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH17O14917 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDH17O14917 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDH17O14917 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH17O14917 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH17O14917 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.16■□□□□ 0.66
PCDH17O14917 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDH17O14917 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH17O14917 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH17O14917 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH17O14917 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH17O14917 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH17O14917 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH17O14917 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH17O14917 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH17O14917 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
PCDH17O14917 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.15■□□□□ 0.66
PCDH17O14917 POU5F1P3-201ENST00000428824 1078 ntBASIC19.15■□□□□ 0.66
PCDH17O14917 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH17O14917 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH17O14917 AC060766.5-201ENST00000590539 871 ntBASIC19.15■□□□□ 0.66
PCDH17O14917 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDH17O14917 AC007225.1-201ENST00000566331 1836 ntBASIC19.15■□□□□ 0.66
PCDH17O14917 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDH17O14917 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms