Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.62■□□□□ 0.73
E2F3O00716 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.62■□□□□ 0.73
E2F3O00716 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
E2F3O00716 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
E2F3O00716 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
E2F3O00716 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
E2F3O00716 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.62■□□□□ 0.73
E2F3O00716 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.62■□□□□ 0.73
E2F3O00716 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
E2F3O00716 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
E2F3O00716 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
E2F3O00716 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.62■□□□□ 0.73
E2F3O00716 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.62■□□□□ 0.73
E2F3O00716 DUX4L16-201ENST00000555130 1264 ntBASIC19.62■□□□□ 0.73
E2F3O00716 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.62■□□□□ 0.73
E2F3O00716 AC142086.2-201ENST00000569753 217 ntBASIC19.62■□□□□ 0.73
E2F3O00716 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.62■□□□□ 0.73
E2F3O00716 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
E2F3O00716 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
E2F3O00716 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
E2F3O00716 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.62■□□□□ 0.73
E2F3O00716 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
E2F3O00716 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
E2F3O00716 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.62■□□□□ 0.73
E2F3O00716 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
E2F3O00716 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
E2F3O00716 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.61■□□□□ 0.73
E2F3O00716 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
E2F3O00716 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
E2F3O00716 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
E2F3O00716 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
E2F3O00716 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.61■□□□□ 0.73
E2F3O00716 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
E2F3O00716 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.61■□□□□ 0.73
E2F3O00716 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.61■□□□□ 0.73
E2F3O00716 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
E2F3O00716 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
E2F3O00716 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
E2F3O00716 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.61■□□□□ 0.73
E2F3O00716 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.61■□□□□ 0.73
E2F3O00716 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.61■□□□□ 0.73
E2F3O00716 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
E2F3O00716 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.61■□□□□ 0.73
E2F3O00716 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
E2F3O00716 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
E2F3O00716 AL691432.2-201ENST00000607222 2038 ntBASIC19.61■□□□□ 0.73
E2F3O00716 BX119927.1-201ENST00000636596 1552 ntBASIC19.61■□□□□ 0.73
E2F3O00716 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.6■□□□□ 0.73
E2F3O00716 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
E2F3O00716 AC068338.2-201ENST00000563278 1430 ntBASIC19.6■□□□□ 0.73
E2F3O00716 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
E2F3O00716 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
E2F3O00716 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
E2F3O00716 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
E2F3O00716 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
E2F3O00716 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
E2F3O00716 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.6■□□□□ 0.73
E2F3O00716 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.6■□□□□ 0.73
E2F3O00716 RARRES2P4-201ENST00000514074 484 ntBASIC19.6■□□□□ 0.73
E2F3O00716 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.6■□□□□ 0.73
E2F3O00716 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
E2F3O00716 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
E2F3O00716 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.6■□□□□ 0.73
E2F3O00716 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
E2F3O00716 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
E2F3O00716 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
E2F3O00716 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.6■□□□□ 0.73
E2F3O00716 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.59■□□□□ 0.73
E2F3O00716 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
E2F3O00716 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
E2F3O00716 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
E2F3O00716 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
E2F3O00716 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
E2F3O00716 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
E2F3O00716 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
E2F3O00716 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
E2F3O00716 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
E2F3O00716 CD99P1-205ENST00000527459 561 ntBASIC19.59■□□□□ 0.73
E2F3O00716 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.59■□□□□ 0.73
E2F3O00716 TMEM191A-211ENST00000637163 1067 ntBASIC19.59■□□□□ 0.73
E2F3O00716 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.59■□□□□ 0.73
E2F3O00716 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
E2F3O00716 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
E2F3O00716 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.59■□□□□ 0.73
E2F3O00716 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
E2F3O00716 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
E2F3O00716 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
E2F3O00716 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
E2F3O00716 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
E2F3O00716 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
E2F3O00716 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
E2F3O00716 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
E2F3O00716 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
E2F3O00716 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
E2F3O00716 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
E2F3O00716 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
E2F3O00716 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
E2F3O00716 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.58■□□□□ 0.72
E2F3O00716 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
E2F3O00716 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms