Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCL21O00585 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL21O00585 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCL21O00585 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.81■□□□□ 0.44
CCL21O00585 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.81■□□□□ 0.44
CCL21O00585 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.81■□□□□ 0.44
CCL21O00585 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.81■□□□□ 0.44
CCL21O00585 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.81■□□□□ 0.44
CCL21O00585 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.81■□□□□ 0.44
CCL21O00585 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCL21O00585 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CCL21O00585 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.81■□□□□ 0.44
CCL21O00585 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CCL21O00585 AC027702.1-201ENST00000563810 1770 ntBASIC17.81■□□□□ 0.44
CCL21O00585 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.8■□□□□ 0.44
CCL21O00585 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL21O00585 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.8■□□□□ 0.44
CCL21O00585 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.8■□□□□ 0.44
CCL21O00585 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL21O00585 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.8■□□□□ 0.44
CCL21O00585 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.8■□□□□ 0.44
CCL21O00585 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.8■□□□□ 0.44
CCL21O00585 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.8■□□□□ 0.44
CCL21O00585 NAPSB-206ENST00000562112 1266 ntBASIC17.8■□□□□ 0.44
CCL21O00585 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.8■□□□□ 0.44
CCL21O00585 CR392000.1-201ENST00000624770 1228 ntBASIC17.8■□□□□ 0.44
CCL21O00585 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.8■□□□□ 0.44
CCL21O00585 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL21O00585 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL21O00585 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.8■□□□□ 0.44
CCL21O00585 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCL21O00585 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.8■□□□□ 0.44
CCL21O00585 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.8■□□□□ 0.44
CCL21O00585 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCL21O00585 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCL21O00585 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCL21O00585 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 GUSBP5-202ENST00000510805 1989 ntBASIC17.79■□□□□ 0.44
CCL21O00585 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.79■□□□□ 0.44
CCL21O00585 HLA-G-202ENST00000376815 851 ntBASIC17.79■□□□□ 0.44
CCL21O00585 HLA-G-203ENST00000376818 1127 ntBASIC17.79■□□□□ 0.44
CCL21O00585 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.79■□□□□ 0.44
CCL21O00585 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CCL21O00585 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.79■□□□□ 0.44
CCL21O00585 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 MIR2861-201ENST00000636310 90 ntBASIC17.79■□□□□ 0.44
CCL21O00585 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.79■□□□□ 0.44
CCL21O00585 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCL21O00585 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL21O00585 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL21O00585 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.78■□□□□ 0.44
CCL21O00585 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.78■□□□□ 0.44
CCL21O00585 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.78■□□□□ 0.44
CCL21O00585 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.78■□□□□ 0.44
CCL21O00585 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL21O00585 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.78■□□□□ 0.44
CCL21O00585 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCL21O00585 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.78■□□□□ 0.44
CCL21O00585 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCL21O00585 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCL21O00585 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCL21O00585 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.77■□□□□ 0.44
CCL21O00585 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.77■□□□□ 0.44
CCL21O00585 KRT18P22-201ENST00000402024 1347 ntBASIC17.77■□□□□ 0.44
CCL21O00585 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL21O00585 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCL21O00585 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCL21O00585 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL21O00585 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL21O00585 AC113347.1-201ENST00000413321 391 ntBASIC17.77■□□□□ 0.44
CCL21O00585 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.77■□□□□ 0.44
CCL21O00585 AL137013.1-201ENST00000432946 1228 ntBASIC17.77■□□□□ 0.44
CCL21O00585 KRT18P57-201ENST00000443599 1254 ntBASIC17.77■□□□□ 0.44
CCL21O00585 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.77■□□□□ 0.44
CCL21O00585 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.77■□□□□ 0.44
CCL21O00585 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.77■□□□□ 0.44
CCL21O00585 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL21O00585 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCL21O00585 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCL21O00585 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCL21O00585 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CCL21O00585 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL21O00585 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.76■□□□□ 0.43
CCL21O00585 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.76■□□□□ 0.43
CCL21O00585 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL21O00585 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCL21O00585 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.76■□□□□ 0.43
CCL21O00585 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL21O00585 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms