Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 UBE2DNL-204ENST00000602536 740 ntBASIC18.96■□□□□ 0.63
CLIC1O00299 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.96■□□□□ 0.63
CLIC1O00299 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC1O00299 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.95■□□□□ 0.62
CLIC1O00299 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CLIC1O00299 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC1O00299 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.95■□□□□ 0.62
CLIC1O00299 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CLIC1O00299 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC1O00299 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.95■□□□□ 0.62
CLIC1O00299 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLIC1O00299 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLIC1O00299 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLIC1O00299 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.95■□□□□ 0.62
CLIC1O00299 PGM5P4-201ENST00000421970 445 ntBASIC18.95■□□□□ 0.62
CLIC1O00299 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC1O00299 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.95■□□□□ 0.62
CLIC1O00299 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLIC1O00299 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC1O00299 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC1O00299 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.95■□□□□ 0.62
CLIC1O00299 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLIC1O00299 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.95■□□□□ 0.62
CLIC1O00299 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLIC1O00299 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC1O00299 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIC1O00299 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLIC1O00299 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIC1O00299 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLIC1O00299 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIC1O00299 AL356652.1-201ENST00000615962 565 ntBASIC18.94■□□□□ 0.62
CLIC1O00299 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIC1O00299 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIC1O00299 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIC1O00299 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIC1O00299 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC1O00299 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.93■□□□□ 0.62
CLIC1O00299 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC1O00299 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC1O00299 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC1O00299 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC1O00299 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC1O00299 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLIC1O00299 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.93■□□□□ 0.62
CLIC1O00299 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.93■□□□□ 0.62
CLIC1O00299 KRT18P61-201ENST00000585825 1298 ntBASIC18.93■□□□□ 0.62
CLIC1O00299 MYCNOS-205ENST00000641950 531 ntBASIC18.93■□□□□ 0.62
CLIC1O00299 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC1O00299 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC1O00299 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CLIC1O00299 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CLIC1O00299 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC1O00299 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLIC1O00299 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC1O00299 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.93■□□□□ 0.62
CLIC1O00299 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC1O00299 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.93■□□□□ 0.62
CLIC1O00299 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLIC1O00299 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIC1O00299 AC087633.2-202ENST00000565166 1439 ntBASIC18.92■□□□□ 0.62
CLIC1O00299 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIC1O00299 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CLIC1O00299 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.92■□□□□ 0.62
CLIC1O00299 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms