Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 NUDT16P1-203ENST00000513809 620 ntBASIC16.74■□□□□ 0.27
RNF223E7ERA6 AC023632.3-201ENST00000521633 145 ntBASIC16.74■□□□□ 0.27
RNF223E7ERA6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF223E7ERA6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF223E7ERA6 AL121906.2-201ENST00000621597 723 ntBASIC16.74■□□□□ 0.27
RNF223E7ERA6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF223E7ERA6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF223E7ERA6 AC079598.2-202ENST00000546624 1451 ntBASIC16.73■□□□□ 0.27
RNF223E7ERA6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 KRT18P57-201ENST00000443599 1254 ntBASIC16.73■□□□□ 0.27
RNF223E7ERA6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 AL031963.3-201ENST00000606441 850 ntBASIC16.73■□□□□ 0.27
RNF223E7ERA6 REXO1L10P-201ENST00000615707 1290 ntBASIC16.73■□□□□ 0.27
RNF223E7ERA6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 LINC01568-207ENST00000641790 1380 ntBASIC16.73■□□□□ 0.27
RNF223E7ERA6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF223E7ERA6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF223E7ERA6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 AC006213.4-201ENST00000616184 634 ntBASIC16.72■□□□□ 0.27
RNF223E7ERA6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.72■□□□□ 0.27
RNF223E7ERA6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF223E7ERA6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF223E7ERA6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RNF223E7ERA6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF223E7ERA6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF223E7ERA6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF223E7ERA6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF223E7ERA6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF223E7ERA6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RNF223E7ERA6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RNF223E7ERA6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF223E7ERA6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF223E7ERA6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF223E7ERA6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF223E7ERA6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
RNF223E7ERA6 AC242852.2-201ENST00000615738 1807 ntBASIC16.7■□□□□ 0.26
RNF223E7ERA6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF223E7ERA6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 AC011484.1-201ENST00000377652 1995 ntBASIC16.7■□□□□ 0.26
RNF223E7ERA6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF223E7ERA6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms