Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.7■■□□□ 1.06
USP27XA6NNY8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP27XA6NNY8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP27XA6NNY8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP27XA6NNY8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
USP27XA6NNY8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP27XA6NNY8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP27XA6NNY8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP27XA6NNY8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP27XA6NNY8 AL032819.2-201ENST00000624543 2162 ntBASIC21.7■■□□□ 1.06
USP27XA6NNY8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.69■■□□□ 1.06
USP27XA6NNY8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP27XA6NNY8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP27XA6NNY8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP27XA6NNY8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP27XA6NNY8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
USP27XA6NNY8 BX842568.3-201ENST00000418104 571 ntBASIC21.68■■□□□ 1.06
USP27XA6NNY8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.68■■□□□ 1.06
USP27XA6NNY8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP27XA6NNY8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.68■■□□□ 1.06
USP27XA6NNY8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.68■■□□□ 1.06
USP27XA6NNY8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP27XA6NNY8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.68■■□□□ 1.06
USP27XA6NNY8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP27XA6NNY8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP27XA6NNY8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP27XA6NNY8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
USP27XA6NNY8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
USP27XA6NNY8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.67■■□□□ 1.06
USP27XA6NNY8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.67■■□□□ 1.06
USP27XA6NNY8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 AL138781.2-201ENST00000617896 1843 ntBASIC21.67■■□□□ 1.06
USP27XA6NNY8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
USP27XA6NNY8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.67■■□□□ 1.06
USP27XA6NNY8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.67■■□□□ 1.06
USP27XA6NNY8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
USP27XA6NNY8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.67■■□□□ 1.06
USP27XA6NNY8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.67■■□□□ 1.06
USP27XA6NNY8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
USP27XA6NNY8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP27XA6NNY8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.66■■□□□ 1.06
USP27XA6NNY8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP27XA6NNY8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP27XA6NNY8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP27XA6NNY8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.66■■□□□ 1.06
USP27XA6NNY8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP27XA6NNY8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.66■■□□□ 1.06
USP27XA6NNY8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP27XA6NNY8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.66■■□□□ 1.06
USP27XA6NNY8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP27XA6NNY8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP27XA6NNY8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
USP27XA6NNY8 IGHV3-19-201ENST00000521488 291 ntBASIC21.66■■□□□ 1.06
USP27XA6NNY8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
USP27XA6NNY8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP27XA6NNY8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP27XA6NNY8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
USP27XA6NNY8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.66■■□□□ 1.06
USP27XA6NNY8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.66■■□□□ 1.06
USP27XA6NNY8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP27XA6NNY8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.66■■□□□ 1.06
USP27XA6NNY8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP27XA6NNY8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.65■■□□□ 1.06
USP27XA6NNY8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.65■■□□□ 1.06
USP27XA6NNY8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
USP27XA6NNY8 AC104581.1-202ENST00000635932 2618 ntBASIC21.65■■□□□ 1.06
USP27XA6NNY8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms