Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM90A9PA6NNJ1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.46■□□□□ 0.22
FAM90A9PA6NNJ1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FAM90A9PA6NNJ1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.46■□□□□ 0.22
FAM90A9PA6NNJ1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
FAM90A9PA6NNJ1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
FAM90A9PA6NNJ1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FAM90A9PA6NNJ1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FAM90A9PA6NNJ1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 MCRIP2P1-201ENST00000394346 511 ntBASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 CYP21A1P-202ENST00000354927 1481 ntBASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM90A9PA6NNJ1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 GUSBP6-202ENST00000438529 1198 ntBASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 TSPY6P-201ENST00000448518 926 ntBASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 AL391422.3-201ENST00000603791 2761 ntBASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 AFG3L1P-217ENST00000557444 2447 ntBASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM90A9PA6NNJ1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 CYP2T3P-201ENST00000601990 817 ntBASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM90A9PA6NNJ1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM90A9PA6NNJ1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.42■□□□□ 0.22
FAM90A9PA6NNJ1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
FAM90A9PA6NNJ1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM90A9PA6NNJ1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM90A9PA6NNJ1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM90A9PA6NNJ1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms