Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 AC007322.4-201ENST00000509611 723 ntBASIC16.08■□□□□ 0.16
CGB1A6NKQ9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 CYP21A1P-202ENST00000354927 1481 ntBASIC16.08■□□□□ 0.16
CGB1A6NKQ9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 AC137761.2-201ENST00000561729 223 ntBASIC16.07■□□□□ 0.16
CGB1A6NKQ9 RARRES2P6-201ENST00000567333 442 ntBASIC16.07■□□□□ 0.16
CGB1A6NKQ9 AC145350.3-201ENST00000569033 163 ntBASIC16.07■□□□□ 0.16
CGB1A6NKQ9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 AC087633.2-202ENST00000565166 1439 ntBASIC16.07■□□□□ 0.16
CGB1A6NKQ9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CGB1A6NKQ9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 CNN2P6-201ENST00000439038 900 ntBASIC16.06■□□□□ 0.16
CGB1A6NKQ9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 AL356652.1-201ENST00000615962 565 ntBASIC16.06■□□□□ 0.16
CGB1A6NKQ9 AC013268.1-206ENST00000638368 961 ntBASIC16.06■□□□□ 0.16
CGB1A6NKQ9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 AC112229.1-201ENST00000639295 961 ntBASIC16.06■□□□□ 0.16
CGB1A6NKQ9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CGB1A6NKQ9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 KRT18P11-201ENST00000435214 1283 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms