Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.4■■□□□ 1.02
RCCD1A6NED2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RCCD1A6NED2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.4■■□□□ 1.02
RCCD1A6NED2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RCCD1A6NED2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RCCD1A6NED2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RCCD1A6NED2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RCCD1A6NED2 AC123595.1-201ENST00000440769 1046 ntBASIC21.4■■□□□ 1.02
RCCD1A6NED2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.4■■□□□ 1.02
RCCD1A6NED2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.4■■□□□ 1.02
RCCD1A6NED2 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.4■■□□□ 1.02
RCCD1A6NED2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RCCD1A6NED2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RCCD1A6NED2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.4■■□□□ 1.02
RCCD1A6NED2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RCCD1A6NED2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RCCD1A6NED2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RCCD1A6NED2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RCCD1A6NED2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RCCD1A6NED2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RCCD1A6NED2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RCCD1A6NED2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.39■■□□□ 1.02
RCCD1A6NED2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
RCCD1A6NED2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RCCD1A6NED2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RCCD1A6NED2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.39■■□□□ 1.01
RCCD1A6NED2 FAM21FP-204ENST00000608637 956 ntBASIC21.39■■□□□ 1.01
RCCD1A6NED2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.39■■□□□ 1.01
RCCD1A6NED2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RCCD1A6NED2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RCCD1A6NED2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RCCD1A6NED2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RCCD1A6NED2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RCCD1A6NED2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.38■■□□□ 1.01
RCCD1A6NED2 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.38■■□□□ 1.01
RCCD1A6NED2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RCCD1A6NED2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.38■■□□□ 1.01
RCCD1A6NED2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
RCCD1A6NED2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RCCD1A6NED2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RCCD1A6NED2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RCCD1A6NED2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RCCD1A6NED2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.38■■□□□ 1.01
RCCD1A6NED2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
RCCD1A6NED2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 KRT18P14-201ENST00000534205 1250 ntBASIC21.37■■□□□ 1.01
RCCD1A6NED2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RCCD1A6NED2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RCCD1A6NED2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 YBX1P1-201ENST00000445822 960 ntBASIC21.36■■□□□ 1.01
RCCD1A6NED2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.36■■□□□ 1.01
RCCD1A6NED2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RCCD1A6NED2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms