Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 AC103834.1-201ENST00000520383 144 ntBASIC16.37■□□□□ 0.21
RNF222A6NCQ9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF222A6NCQ9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF222A6NCQ9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF222A6NCQ9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 MIR3181-201ENST00000578512 73 ntBASIC16.34■□□□□ 0.21
RNF222A6NCQ9 MTDHP2-201ENST00000601468 714 ntBASIC16.34■□□□□ 0.21
RNF222A6NCQ9 AC092028.1-203ENST00000608262 953 ntBASIC16.34■□□□□ 0.21
RNF222A6NCQ9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF222A6NCQ9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF222A6NCQ9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RNF222A6NCQ9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF222A6NCQ9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 MIR2861-201ENST00000636310 90 ntBASIC16.33■□□□□ 0.2
RNF222A6NCQ9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms