Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 AC005082.1-201ENST00000413042 2259 ntBASIC17.54■□□□□ 0.4
SHISA3A0PJX4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 AC245052.3-201ENST00000450182 901 ntBASIC17.54■□□□□ 0.4
SHISA3A0PJX4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 AC008175.2-201ENST00000612840 297 ntBASIC17.54■□□□□ 0.4
SHISA3A0PJX4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHISA3A0PJX4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 TSPY26P-201ENST00000476365 1326 ntBASIC17.53■□□□□ 0.4
SHISA3A0PJX4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.53■□□□□ 0.4
SHISA3A0PJX4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 AC131212.1-201ENST00000613771 668 ntBASIC17.53■□□□□ 0.4
SHISA3A0PJX4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 AL032819.2-201ENST00000624543 2162 ntBASIC17.53■□□□□ 0.4
SHISA3A0PJX4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.53■□□□□ 0.4
SHISA3A0PJX4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 AL356441.2-201ENST00000443009 864 ntBASIC17.52■□□□□ 0.4
SHISA3A0PJX4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHISA3A0PJX4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
SHISA3A0PJX4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.52■□□□□ 0.39
SHISA3A0PJX4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.52■□□□□ 0.39
SHISA3A0PJX4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHISA3A0PJX4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SHISA3A0PJX4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHISA3A0PJX4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHISA3A0PJX4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 KRT16P2-201ENST00000414673 1423 ntBASIC17.51■□□□□ 0.39
SHISA3A0PJX4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms