Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AC011484.1-201ENST00000377652 1995 ntBASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AC091799.1-201ENST00000422823 811 ntBASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 MIR4651-201ENST00000582622 73 ntBASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TCRBV4S1A1TA0A5B7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FAM21FP-204ENST00000608637 956 ntBASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AL391422.3-201ENST00000603791 2761 ntBASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.14■□□□□ 0.17
TCRBV4S1A1TA0A5B7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 DUSP5P2-201ENST00000426873 1033 ntBASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TCRBV4S1A1TA0A5B7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC091874.3-201ENST00000512672 1195 ntBASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms