Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 AC126544.1-201ENST00000580842 1059 ntBASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 AC233992.3-201ENST00000607491 485 ntBASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRDV1A0A1B0GX56 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.68■□□□□ 0.42
TRDV1A0A1B0GX56 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 MIR4466-201ENST00000606121 54 ntBASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 AL138781.2-201ENST00000617896 1843 ntBASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.67■□□□□ 0.42
TRDV1A0A1B0GX56 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TRDV1A0A1B0GX56 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms