Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
CCDC196A0A1B0GTZ2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 ID1-201ENST00000376105 1233 ntBASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 AC133041.1-202ENST00000642053 222 ntBASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.42■■□□□ 1.34
CCDC196A0A1B0GTZ2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 HLA-L-209ENST00000420110 1011 ntBASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 AC097658.1-201ENST00000475555 843 ntBASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 AC023632.3-201ENST00000521633 145 ntBASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 AL138781.1-201ENST00000566567 1274 ntBASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC196A0A1B0GTZ2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 KRT8P20-201ENST00000423953 1409 ntBASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 KRT8P17-201ENST00000453110 1448 ntBASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC196A0A1B0GTZ2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CCDC196A0A1B0GTZ2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CCDC196A0A1B0GTZ2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.39■■□□□ 1.34
CCDC196A0A1B0GTZ2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CCDC196A0A1B0GTZ2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CCDC196A0A1B0GTZ2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 HLA-G-202ENST00000376815 851 ntBASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 HLA-G-203ENST00000376818 1127 ntBASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 AC069152.1-201ENST00000438030 544 ntBASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 AL031963.3-201ENST00000606441 850 ntBASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 MYC-209ENST00000641252 345 ntBASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC196A0A1B0GTZ2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC196A0A1B0GTZ2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms