Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 AL358852.1-201ENST00000623174 1268 ntBASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV27A0A0K0K1C4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV27A0A0K0K1C4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRBV27A0A0K0K1C4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
TRBV27A0A0K0K1C4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.21□□□□□ -0.14
TRBV27A0A0K0K1C4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.21□□□□□ -0.14
TRBV27A0A0K0K1C4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV27A0A0K0K1C4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV27A0A0K0K1C4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV27A0A0K0K1C4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV27A0A0K0K1C4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV27A0A0K0K1C4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 AC010141.2-201ENST00000452426 721 ntBASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 FAM21FP-204ENST00000608637 956 ntBASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 AL354811.1-201ENST00000610286 706 ntBASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV27A0A0K0K1C4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 AL355001.2-201ENST00000620617 1191 ntBASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 RASA4CP-201ENST00000424092 1398 ntBASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV27A0A0K0K1C4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms