Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 AC008406.3-201ENST00000620001 1374 ntBASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 AL354811.1-201ENST00000610286 706 ntBASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 AL136967.2-201ENST00000623968 743 ntBASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV5A0A0B4J249 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 AC091305.1-201ENST00000479476 895 ntBASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV5A0A0B4J249 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 TMEM179-206ENST00000616017 1645 ntBASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 KRT8P36-201ENST00000489121 1440 ntBASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV5A0A0B4J249 AC004408.2-201ENST00000623613 2777 ntBASIC15.58■□□□□ 0.09
TRAV5A0A0B4J249 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV5A0A0B4J249 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV5A0A0B4J249 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV5A0A0B4J249 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV5A0A0B4J249 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.58■□□□□ 0.09
TRAV5A0A0B4J249 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.09
TRAV5A0A0B4J249 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.58■□□□□ 0.09
TRAV5A0A0B4J249 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
TRAV5A0A0B4J249 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 AC010141.2-201ENST00000452426 721 ntBASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 AL031432.3-201ENST00000607698 485 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms