Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC187A0A096LP49 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC187A0A096LP49 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.14■□□□□ 0.66
CCDC187A0A096LP49 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 RN7SL850P-201ENST00000579959 291 ntBASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 MIR2861-201ENST00000636310 90 ntBASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC187A0A096LP49 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 NUDT16P1-203ENST00000513809 620 ntBASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 ECEL1P1-201ENST00000373592 1742 ntBASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC187A0A096LP49 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC187A0A096LP49 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 UNC93B2-201ENST00000285383 730 ntBASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 RBM17P1-201ENST00000453646 1190 ntBASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 AL445228.2-201ENST00000605589 952 ntBASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC187A0A096LP49 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 HLA-G-202ENST00000376815 851 ntBASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 HLA-G-203ENST00000376818 1127 ntBASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 AC145285.6-201ENST00000604632 637 ntBASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 MIR6786-201ENST00000616843 113 ntBASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms