Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC8.19□□□□□ -1.1
MTHFRP42898 AC005099.1-201ENST00000442083 610 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 RPS4XP19-201ENST00000460237 736 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
MTHFRP42898 IGHV7-40-201ENST00000520963 296 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC8.19□□□□□ -1.1
MTHFRP42898 AP006587.5-201ENST00000532033 739 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.19□□□□□ -1.1
MTHFRP42898 AC103968.1-201ENST00000557841 573 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 DNM1P31-201ENST00000564149 696 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.19□□□□□ -1.1
MTHFRP42898 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.19□□□□□ -1.1
MTHFRP42898 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.19□□□□□ -1.1
MTHFRP42898 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC8.19□□□□□ -1.1
MTHFRP42898 AC135050.6-202ENST00000613584 392 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.19□□□□□ -1.1
MTHFRP42898 AL121985.2-201ENST00000621192 555 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC8.19□□□□□ -1.1
MTHFRP42898 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.19□□□□□ -1.1
MTHFRP42898 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
MTHFRP42898 CDYLP1-201ENST00000419017 1458 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 OR7E11P-202ENST00000642027 1491 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.19□□□□□ -1.1
MTHFRP42898 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC8.19□□□□□ -1.1
MTHFRP42898 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MTHFRP42898 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MTHFRP42898 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MTHFRP42898 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.18□□□□□ -1.1
MTHFRP42898 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
MTHFRP42898 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MTHFRP42898 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
MTHFRP42898 AL450124.1-201ENST00000376401 353 ntBASIC8.18□□□□□ -1.1
MTHFRP42898 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
MTHFRP42898 RN7SKP225-201ENST00000410405 352 ntBASIC8.18□□□□□ -1.1
MTHFRP42898 PPIAP30-201ENST00000415473 519 ntBASIC8.18□□□□□ -1.1
MTHFRP42898 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC8.18□□□□□ -1.1
MTHFRP42898 FABP5P10-201ENST00000435729 408 ntBASIC8.18□□□□□ -1.1
MTHFRP42898 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MTHFRP42898 AC013429.1-201ENST00000456604 422 ntBASIC8.18□□□□□ -1.1
MTHFRP42898 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.18□□□□□ -1.1
MTHFRP42898 AC105391.1-201ENST00000503155 1045 ntBASIC8.18□□□□□ -1.1
MTHFRP42898 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.18□□□□□ -1.1
MTHFRP42898 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.18□□□□□ -1.1
MTHFRP42898 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.18□□□□□ -1.1
MTHFRP42898 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
MTHFRP42898 AC024085.1-201ENST00000604299 432 ntBASIC8.18□□□□□ -1.1
MTHFRP42898 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.18□□□□□ -1.1
MTHFRP42898 AC091059.2-201ENST00000623355 614 ntBASIC8.18□□□□□ -1.1
MTHFRP42898 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.18□□□□□ -1.1
MTHFRP42898 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
MTHFRP42898 AL606490.2-201ENST00000457562 1330 ntBASIC8.18□□□□□ -1.1
MTHFRP42898 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
MTHFRP42898 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC8.18□□□□□ -1.1
MTHFRP42898 AP002759.1-201ENST00000526840 1571 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MTHFRP42898 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
MTHFRP42898 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MTHFRP42898 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.18□□□□□ -1.1
MTHFRP42898 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
MTHFRP42898 AC068044.1-201ENST00000441585 1978 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
MTHFRP42898 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
MTHFRP42898 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
MTHFRP42898 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
MTHFRP42898 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
MTHFRP42898 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
MTHFRP42898 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
MTHFRP42898 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
MTHFRP42898 SNORA7B-201ENST00000384360 139 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 AL139100.1-201ENST00000408001 498 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 RPS14P4-201ENST00000415880 418 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 AL671986.1-201ENST00000422197 955 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 AKR1B10P1-201ENST00000425765 942 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC8.17□□□□□ -1.1
MTHFRP42898 RN7SL36P-201ENST00000469345 276 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 RN7SL635P-201ENST00000492123 296 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC8.17□□□□□ -1.1
MTHFRP42898 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
MTHFRP42898 AC016559.1-201ENST00000511420 199 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.17□□□□□ -1.1
MTHFRP42898 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC8.17□□□□□ -1.1
MTHFRP42898 AL589765.5-201ENST00000596133 515 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 AC087623.4-201ENST00000606593 695 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 AC048341.3-201ENST00000619323 491 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 AC106782.7-201ENST00000624024 418 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 AC133555.5-201ENST00000624430 418 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 AC243725.1-201ENST00000637164 436 ntBASIC8.17□□□□□ -1.1
MTHFRP42898 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.17□□□□□ -1.1
MTHFRP42898 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
MTHFRP42898 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC8.17□□□□□ -1.1
MTHFRP42898 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms