RNA–Protein interactions for RNA: ENST00000526840.1

AP002759.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP002759.1, Length 1,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002759.1-201ENST00000526840 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
AP002759.1-201ENST00000526840 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
AP002759.1-201ENST00000526840 PHF23Q9BUL5 403 aaPredicted RBP22.03■■□□□ 1.12
AP002759.1-201ENST00000526840 SENP3Q9H4L4 574 aaPredicted RBP21.95■■□□□ 1.1
AP002759.1-201ENST00000526840 FOXD1Q16676 465 aa20.38■□□□□ 0.85
AP002759.1-201ENST00000526840 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
AP002759.1-201ENST00000526840 ADRA2BP18089 450 aa19.5■□□□□ 0.71
AP002759.1-201ENST00000526840 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
AP002759.1-201ENST00000526840 PIAS4Q8N2W9 510 aaPredicted RBP19.23■□□□□ 0.67
AP002759.1-201ENST00000526840 MSH5O43196 834 aa18.85■□□□□ 0.61
AP002759.1-201ENST00000526840 NISCHQ9Y2I1 1504 aa18.4■□□□□ 0.54
AP002759.1-201ENST00000526840 PPP4R3CPQ6ZMV5 832 aa17.89■□□□□ 0.45
AP002759.1-201ENST00000526840 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
AP002759.1-201ENST00000526840 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
AP002759.1-201ENST00000526840 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
AP002759.1-201ENST00000526840 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
AP002759.1-201ENST00000526840 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
AP002759.1-201ENST00000526840 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
AP002759.1-201ENST00000526840 KCNA4P22459 653 aa17.32■□□□□ 0.36
AP002759.1-201ENST00000526840 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
AP002759.1-201ENST00000526840 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
AP002759.1-201ENST00000526840 HOXD11P31277 338 aaPredicted RBP17.04■□□□□ 0.32
AP002759.1-201ENST00000526840 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
AP002759.1-201ENST00000526840 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
AP002759.1-201ENST00000526840 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
AP002759.1-201ENST00000526840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.32■□□□□ 0.2
AP002759.1-201ENST00000526840 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
AP002759.1-201ENST00000526840 RNF39Q9H2S5 420 aa16.13■□□□□ 0.17
AP002759.1-201ENST00000526840 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
AP002759.1-201ENST00000526840 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
AP002759.1-201ENST00000526840 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
AP002759.1-201ENST00000526840 C1QBPQ07021 282 aaKnown RBP15.93■□□□□ 0.14
AP002759.1-201ENST00000526840 ZBTB22O15209 634 aa15.92■□□□□ 0.14
AP002759.1-201ENST00000526840 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
AP002759.1-201ENST00000526840 CACNB1Q02641 598 aaPredicted RBP15.87■□□□□ 0.13
AP002759.1-201ENST00000526840 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
AP002759.1-201ENST00000526840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.75■□□□□ 0.11
AP002759.1-201ENST00000526840 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
AP002759.1-201ENST00000526840 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
AP002759.1-201ENST00000526840 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
AP002759.1-201ENST00000526840 APLP2Q06481 763 aa15.63■□□□□ 0.09
AP002759.1-201ENST00000526840 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
AP002759.1-201ENST00000526840 CAPN15O75808 1086 aa15.59■□□□□ 0.09
AP002759.1-201ENST00000526840 ZCCHC6Q5VYS8 1495 aaKnown RBP15.49■□□□□ 0.07
AP002759.1-201ENST00000526840 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
AP002759.1-201ENST00000526840 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
AP002759.1-201ENST00000526840 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
AP002759.1-201ENST00000526840 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
AP002759.1-201ENST00000526840 DSG3P32926 999 aa15.31■□□□□ 0.04
AP002759.1-201ENST00000526840 ABCB7O75027 752 aa15.28■□□□□ 0.04
AP002759.1-201ENST00000526840 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
AP002759.1-201ENST00000526840 POLA2Q14181 598 aa15.18■□□□□ 0.02
AP002759.1-201ENST00000526840 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
AP002759.1-201ENST00000526840 SHROOM4Q9ULL8 1493 aa15.09■□□□□ 0.01
AP002759.1-201ENST00000526840 MYO15BQ96JP2 1530 aa15.03■□□□□ -0
AP002759.1-201ENST00000526840 ABCC9O60706 1549 aa14.96□□□□□ -0.01
AP002759.1-201ENST00000526840 NACADO15069 1562 aa14.9□□□□□ -0.02
AP002759.1-201ENST00000526840 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
AP002759.1-201ENST00000526840 FBLN2P98095 1184 aa14.8□□□□□ -0.04
AP002759.1-201ENST00000526840 RB1CC1Q8TDY2 1594 aa14.74□□□□□ -0.05
AP002759.1-201ENST00000526840 SCRIBQ14160 1630 aa14.72□□□□□ -0.05
AP002759.1-201ENST00000526840 MKRN4PQ13434 485 aaPredicted RBP14.72□□□□□ -0.05
AP002759.1-201ENST00000526840 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
AP002759.1-201ENST00000526840 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
AP002759.1-201ENST00000526840 RBM42Q9BTD8 480 aaKnown RBP14.6□□□□□ -0.07
AP002759.1-201ENST00000526840 SPDYE2BA6NHP3 402 aa14.47□□□□□ -0.09
AP002759.1-201ENST00000526840 SPDYE6P0CI01 402 aa14.47□□□□□ -0.09
AP002759.1-201ENST00000526840 SPDYE2Q495Y8 402 aa14.47□□□□□ -0.09
AP002759.1-201ENST00000526840 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
AP002759.1-201ENST00000526840 UNC13AQ9UPW8 1703 aa14.39□□□□□ -0.11
AP002759.1-201ENST00000526840 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
AP002759.1-201ENST00000526840 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
AP002759.1-201ENST00000526840 SSUH2Q9Y2M2 353 aa14.33□□□□□ -0.12
AP002759.1-201ENST00000526840 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
AP002759.1-201ENST00000526840 FKBP8Q14318 412 aa14.26□□□□□ -0.13
AP002759.1-201ENST00000526840 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
AP002759.1-201ENST00000526840 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
AP002759.1-201ENST00000526840 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
AP002759.1-201ENST00000526840 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
AP002759.1-201ENST00000526840 BICRAQ9NZM4 1560 aa14.2□□□□□ -0.14
AP002759.1-201ENST00000526840 MROH2BQ7Z745 1585 aa14.19□□□□□ -0.14
AP002759.1-201ENST00000526840 SMARCA4P51532 1647 aa14.13□□□□□ -0.15
AP002759.1-201ENST00000526840 PITPNM1O00562 1244 aa14.1□□□□□ -0.15
AP002759.1-201ENST00000526840 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
AP002759.1-201ENST00000526840 WIZO95785 1651 aa14.1□□□□□ -0.15
AP002759.1-201ENST00000526840 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
AP002759.1-201ENST00000526840 CHRDL2Q6WN34 429 aa14.07□□□□□ -0.16
AP002759.1-201ENST00000526840 PROM2Q8N271 834 aa14.02□□□□□ -0.16
AP002759.1-201ENST00000526840 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
AP002759.1-201ENST00000526840 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.17
AP002759.1-201ENST00000526840 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
AP002759.1-201ENST00000526840 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
AP002759.1-201ENST00000526840 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
AP002759.1-201ENST00000526840 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
AP002759.1-201ENST00000526840 ATAD2BQ9ULI0 1458 aa13.84□□□□□ -0.19
AP002759.1-201ENST00000526840 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.19
AP002759.1-201ENST00000526840 BAZ1BQ9UIG0 1483 aaKnown RBP13.82□□□□□ -0.2
AP002759.1-201ENST00000526840 CCDC88BA6NC98 1476 aa13.81□□□□□ -0.2
AP002759.1-201ENST00000526840 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
AP002759.1-201ENST00000526840 POTEHQ6S545 545 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms