Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP003499.3-201ENST00000624680 857 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 XRCC6P2-201ENST00000457831 1822 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 TMEM75-201ENST00000624314 2165 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 MFSD8-217ENST00000641178 4374 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC107980.1-201ENST00000558671 3355 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SNX18Q96RF0 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
SNX18Q96RF0 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 RAD17P2-201ENST00000451754 1977 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AC093829.1-201ENST00000506662 1618 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 RNA5SP71-201ENST00000362967 126 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 RIT1-201ENST00000368322 855 ntTSL 3 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 CREM-213ENST00000374734 711 ntTSL 5 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 RN7SKP168-201ENST00000410910 300 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 Z98752.2-201ENST00000432727 312 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 ZNF736P11Y-201ENST00000442535 1213 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 ZNF736P12Y-201ENST00000443152 1243 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 DBIL5P-202ENST00000453414 250 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 ZNF736P4Y-201ENST00000454995 1243 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 CREM-231ENST00000479070 939 ntTSL 5 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AC008799.1-201ENST00000495909 457 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 AC113208.1-201ENST00000497944 318 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 FAM177A1P1-201ENST00000503598 473 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 SNRPCP8-201ENST00000514820 211 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AP000435.1-201ENST00000528539 496 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AC027013.1-201ENST00000554412 1057 ntTSL 2 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 pRNA.12-201ENST00000614353 90 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 pRNA.3-201ENST00000615048 90 ntBASIC7.21□□□□□ -1.26
SNX18Q96RF0 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
SNX18Q96RF0 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNX18Q96RF0 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC009237.3-203ENST00000442128 3551 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 OR56A1-201ENST00000316650 1071 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 RN7SKP208-201ENST00000365474 361 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AL035698.1-201ENST00000405812 564 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms